RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PJA1Q8NG27 643 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 NKD2Q969F2 451 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 DCHS1Q96JQ0 3298 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 COL4A3Q01955 1670 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 RIF1Q5UIP0 2472 aaKnown RBP16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 STK25O00506 426 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 DCNP07585 359 aaKnown RBP16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 PRSS36Q5K4E3 855 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 FAM186BQ8IYM0 893 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 TCEAL8Q8IYN2 117 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 RDH13Q8NBN7 331 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 PARD3BQ8TEW8 1205 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 CACTINQ8WUQ7 758 aaKnown RBP16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 ING5Q8WYH8 240 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 KXD1Q9BQD3 176 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 FOXQ1Q9C009 403 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 MRPS23Q9Y3D9 190 aaKnown RBP16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 SIT1Q9Y3P8 196 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 GVINP1Q7Z2Y8 2422 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 PTPRJQ12913 1337 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 DOCK6Q96HP0 2047 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 NOTCH4Q99466 2003 aa16.16■□□□□ 0.18
CDC42SE1-205ENST00000491825 ANO9A1A5B4 782 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 NRG2O14511 850 aaPredicted RBP16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 LRRN2O75325 713 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 SEC24AO95486 1093 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 EPB41P11171 864 aaKnown RBP16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 CEBPBP17676 345 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 RFX1P22670 979 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 PAX3P23760 479 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 AP3M2P53677 418 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 BFSP1Q12934 665 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 CCDC127Q96BQ5 260 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 MED15Q96RN5 788 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 MTMR12Q9C0I1 747 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 GDE1Q9NZC3 331 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 ITGA11Q9UKX5 1188 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 INSL5Q9Y5Q6 135 aa16.15■□□□□ 0.18
CDC42SE1-205ENST00000491825 LRRIQ3A6PVS8 624 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 H7C4K7 107 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 PIRO00625 290 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 IKBKBO14920 756 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 ECI2O75521 394 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 GNA14O95837 355 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 LRG1P02750 347 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 TMEM191BP0C7N4 346 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 DLATP10515 647 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 FCARP24071 287 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 CCR2P41597 374 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 MARSP56192 900 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 STX17P56962 302 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 PRKCQQ04759 706 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 TYRO3Q06418 890 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 MLF2Q15773 248 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 DUOXA2Q1HG44 320 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 TPGS2Q68CL5 300 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 ZNF280DQ6N043 979 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 C1orf127Q8N9H9 656 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 SHDQ96IW2 340 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 DPP3Q9NY33 737 aa16.14■□□□□ 0.17
CDC42SE1-205ENST00000491825 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 FAM186AA6NE01 2351 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 KANSL1LA0AUZ9 987 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 SHISA7A6NL88 538 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 M0QZQ0 153 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 PRRG1O14668 218 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 FGFR1OPO95684 399 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 TNNC2P02585 160 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 KRT13P13646 458 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 PTPN2P17706 415 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 TNNI1P19237 187 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 VAMP7P51809 220 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 ARPP19P56211 112 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 CTXN3Q4LDR2 81 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 SLC44A4Q53GD3 710 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 C1orf210Q8IVY1 113 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 MAML2Q8IZL2 1156 aaPredicted RBP16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 LRRC52Q8N7C0 313 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 APPL2Q8NEU8 664 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 OR5B17Q8NGF7 314 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 TCEAL4Q96EI5 215 aa16.13■□□□□ 0.17
CDC42SE1-205ENST00000491825 MCRS1Q96EZ8 462 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms