RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SOAT2O75908 522 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 RHOBTB3O94955 611 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 FGF19O95750 216 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 LHX1P48742 406 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 CLCN5P51795 746 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 DPYDQ12882 1025 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 CWF19L1Q69YN2 538 aaKnown RBP16.2■□□□□ 0.18
USP39-217ENST00000491659 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
USP39-217ENST00000491659 PCSK1P29120 753 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 NUBP1P53384 320 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 PTPN5P54829 565 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 PFKPQ01813 784 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 TRPC3Q13507 836 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 TEAD2Q15562 447 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 TAF12Q16514 161 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 INTS6LQ5JSJ4 861 aaKnown RBP16.19■□□□□ 0.18
USP39-217ENST00000491659 IER5LQ5T953 404 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 DPH6Q7L8W6 267 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 OSTM1Q86WC4 334 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 TMC8Q8IU68 726 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 SLC9A9Q8IVB4 645 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 PRSS33Q8NF86 280 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 GCNAQ96QF7 691 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 LPIN3Q9BQK8 851 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 GPR88Q9GZN0 384 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 MUC6Q6W4X9 2439 aa16.19■□□□□ 0.18
USP39-217ENST00000491659 OBSL1O75147 1896 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 MIA3Q5JRA6 1907 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 A0A1W2PRU2 124 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 STK25O00506 426 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 PHACTR2O75167 634 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 MOSPD3O75425 235 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 CLSTN1O94985 981 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 NR3C1P04150 777 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 HAPLN1P10915 354 aaPredicted RBP16.18■□□□□ 0.18
USP39-217ENST00000491659 GJA1P17302 382 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 ATF6P18850 670 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 AOC1P19801 751 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 ACAT1P24752 427 aaKnown RBP16.18■□□□□ 0.18
USP39-217ENST00000491659 CDR1P51861 262 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 AP3M2P53677 418 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 TNNC1P63316 161 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 GPC5P78333 572 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 KCNB1Q14721 858 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 SOWAHAQ2M3V2 549 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 FAM78AQ5JUQ0 283 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
USP39-217ENST00000491659 SHKBP1Q8TBC3 707 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 SMARCD2Q92925 531 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 ASB16Q96NS5 453 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 MMS19Q96T76 1030 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 LRRC3Q9BY71 257 aa16.18■□□□□ 0.18
USP39-217ENST00000491659 DENND4CQ5VZ89 1909 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 GABRDO14764 452 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 NPR3P17342 541 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 FCARP24071 287 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 GABRR2P28476 465 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 BIRC3Q13489 604 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 ARHGAP15Q53QZ3 475 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 TANGO2Q6ICL3 276 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 SPATA2LQ8IUW3 424 aaPredicted RBP16.17■□□□□ 0.18
USP39-217ENST00000491659 ZSCAN18Q8TBC5 510 aaPredicted RBP16.17■□□□□ 0.18
USP39-217ENST00000491659 TMEM174Q8WUU8 243 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
USP39-217ENST00000491659 SHDQ96IW2 340 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 SYT15Q9BQS2 421 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 PI4K2AQ9BTU6 479 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 ATXN3LQ9H3M9 355 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 TBC1D17Q9HA65 648 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 ZNF334Q9HCZ1 680 aaPredicted RBP16.17■□□□□ 0.18
USP39-217ENST00000491659 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 TMLHEQ9NVH6 421 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 FRMD4BQ9Y2L6 1034 aa16.17■□□□□ 0.18
USP39-217ENST00000491659 PTPRDP23468 1912 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 TICRRQ7Z2Z1 1910 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 LRRIQ3A6PVS8 624 aaPredicted RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 NRG2O14511 850 aaPredicted RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 WARSP23381 471 aaKnown RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 CDC25CP30307 473 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 ATICP31939 592 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 CASP4P49662 377 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 RPL10AP62906 217 aaKnown RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 NHLH1Q02575 133 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
USP39-217ENST00000491659 PHLDB3Q6NSJ2 640 aa16.16■□□□□ 0.18
USP39-217ENST00000491659 POTEHQ6S545 545 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms