RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	PFKP	Q01813	784 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	SPARCL1	Q14515	664 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	RINT1	Q6NUQ1	792 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	ARC	Q7LC44	396 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	DZIP1	Q86YF9	867 aa	Known RBP	10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	DAW1	Q8N136	415 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	MARCH10	Q8NA82	808 aa	Predicted RBP	10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	FNIP1	Q8TF40	1166 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	LRRC4B	Q9NT99	713 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	GCNT4	Q9P109	453 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	B3GNT3	Q9Y2A9	372 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	SBF1	O95248	1867 aa		10.85	□□□□□ -0.67
SREBF2-208	ENST00000491541	SLC22A1	O15245	554 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	LIAS	O43766	372 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	KRT18	P05783	430 aa	Known RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	CREB1	P16220	341 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	SYCP2L	Q5T4T6	812 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	STEAP4	Q687X5	459 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	CIAPIN1	Q6FI81	312 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	PALB2	Q86YC2	1186 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	CCDC125	Q86Z20	511 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	CPSF7	Q8N684	471 aa	Known RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	SNX29	Q8TEQ0	813 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TOP1MT	Q969P6	601 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	LRRC37B	Q96QE4	947 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	OSBPL8	Q9BZF1	889 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	MAP3K20	Q9NYL2	800 aa	Known RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	hCG_2014768	A0A024R1R8	64 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541		A0A088AWK7	358 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	SLITRK3	O94933	977 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	ZBED1	O96006	694 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	ACTN1	P12814	892 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	ABCB4	P21439	1286 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TXNL4A	P83876	142 aa	Known RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	DRAP1	Q14919	205 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	GLG1	Q92896	1179 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	ANO3	Q9BYT9	981 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	UBE2O	Q9C0C9	1292 aa	Known RBP	10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TAS2R14	Q9NYV8	317 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TAS2R1	Q9NYW7	299 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TOMM70	O94826	608 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	COMT	P21964	271 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	STX2	P32856	288 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	RFC4	P35249	363 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TUBA4A	P68366	448 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	WASHC5	Q12768	1159 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	USP4	Q13107	963 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	FAM47A	Q5JRC9	791 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	SNX30	Q5VWJ9	437 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	TRIM72	Q6ZMU5	477 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	HAUS6	Q7Z4H7	955 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	PCGF5	Q86SE9	256 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	SCYL3	Q8IZE3	742 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	GOLM1	Q8NBJ4	401 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	UBXN10	Q96LJ8	280 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	GBP5	Q96PP8	586 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	PCDH9	Q9HC56	1237 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	BTG4	Q9NY30	223 aa		10.84	□□□□□ -0.67
SREBF2-208	ENST00000491541	ALDH1A2	O94788	518 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	SERPINB2	P05120	415 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	CYP2D6	P10635	497 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	ACO1	P21399	889 aa	Known RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	ERF	P50548	548 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	NUP93	Q8N1F7	819 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	SCG3	Q8WXD2	468 aa	Known RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	NSL1	Q96IY1	281 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZFR	Q96KR1	1074 aa	Known RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	DACH2	Q96NX9	599 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	NUDCD1	Q96RS6	583 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	DNAJC17	Q9NVM6	304 aa	Known RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	TCRBV7S2A1N4T	A0A589	114 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	MATN2	O00339	956 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	TMCC1	O94876	653 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	C7	P10643	843 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	GALNT2	Q10471	571 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	TTLL12	Q14166	644 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	MAP3K21	Q5TCX8	1036 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	C3orf67	Q6ZVT6	689 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	OTOP1	Q7RTM1	612 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	LZTR1	Q8N653	840 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	CFAP57	Q96MR6	1250 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	UBA5	Q9GZZ9	404 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	TBK1	Q9UHD2	729 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	FGFR4	P22455	802 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	HPCA	P84074	193 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	RNF207	Q6ZRF8	634 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZC3H18	Q86VM9	953 aa	Known RBP	10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	COLGALT2	Q8IYK4	626 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	KREMEN1	Q96MU8	473 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	C8orf37	Q96NL8	207 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	DNAJC28	Q9NX36	388 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	DNAJC12	Q9UKB3	198 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	MTUS1	Q9ULD2	1270 aa		10.83	□□□□□ -0.68
SREBF2-208	ENST00000491541	GSTTP1	A0A1W2PQM5	241 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541		A0A1W2PRG0	241 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	TSPY2	A6NKD2	308 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	THAP12	O43422	761 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PROSC	O94903	275 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZNF211	Q13398	564 aa	Predicted RBP	10.82	□□□□□ -0.68

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