RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TMEM196Q5HYL7 178 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 JADE1Q6IE81 842 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 PKN3Q6P5Z2 889 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 KBTBD6Q86V97 674 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 CMTM8Q8IZV2 173 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 C2orf15Q8WU43 125 aaKnown RBP22.36■■□□□ 1.17
CLIP2-208ENST00000491075 ZCWPW1Q9H0M4 648 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 GKN1Q9NS71 199 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 SLC8A2Q9UPR5 921 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 PCDHGA5Q9Y5G8 931 aa22.36■■□□□ 1.17
CLIP2-208ENST00000491075 ATG2BQ96BY7 2078 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 PXNP49023 591 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-208ENST00000491075 ATP2C1P98194 919 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-208ENST00000491075 SMARCB1Q12824 385 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 TMEM132DQ14C87 1099 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 CCDC6Q16204 474 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 N4BP2L1Q5TBK1 243 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-208ENST00000491075 SPPL2BQ8TCT7 592 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 FAM212AQ96EL1 285 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 PLIN2Q99541 437 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 FAM83CQ9BQN1 747 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 MSTO1Q9BUK6 570 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 SLC46A2Q9BY10 475 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 SMG9Q9H0W8 520 aaKnown RBP22.35■■□□□ 1.17
CLIP2-208ENST00000491075 TBX20Q9UMR3 447 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 DERAQ9Y315 318 aa22.35■■□□□ 1.17
CLIP2-208ENST00000491075 FRYQ5TBA9 3013 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 A0A0B4J269 797 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 NPHP3-ACAD11A0A0J9YXS1 232 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 ANO9A1A5B4 782 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 PIRO00625 290 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 TRDMT1O14717 391 aaKnown RBP22.34■■□□□ 1.17
CLIP2-208ENST00000491075 NFICP08651 508 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 AVPR1AP37288 418 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 AMPD2Q01433 879 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 RUNX3Q13761 415 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 PLA2G2CQ5R387 149 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 STPG1Q5TH74 334 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 FSTL4Q6MZW2 842 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 METTL23Q86XA0 190 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 ZC3H10Q96K80 434 aaKnown RBP22.34■■□□□ 1.17
CLIP2-208ENST00000491075 KIF9Q9HAQ2 790 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 HPS4Q9NQG7 708 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 RXFP3Q9NSD7 469 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 CPSF3Q9UKF6 684 aaKnown RBP22.34■■□□□ 1.17
CLIP2-208ENST00000491075 KIAA1549LQ6ZVL6 1849 aa22.34■■□□□ 1.17
CLIP2-208ENST00000491075 K7ENM7 598 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 DDX6P26196 483 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLIP2-208ENST00000491075 TMEM119Q4V9L6 283 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 RILPL1Q5EBL4 403 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 ARSHQ5FYA8 562 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 THEM5Q8N1Q8 247 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 CAMKK1Q8N5S9 505 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 REEP2Q9BRK0 252 aa22.33■■□□□ 1.17
CLIP2-208ENST00000491075 MYO16Q9Y6X6 1858 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 CEP295Q9C0D2 2601 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 MPLP40238 635 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 BFSP1Q12934 665 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 GIPC2Q8TF65 315 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 CHFRQ96EP1 664 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 EBF3Q9H4W6 596 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 VPS45Q9NRW7 570 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 C2CD2Q9Y426 696 aa22.32■■□□□ 1.16
CLIP2-208ENST00000491075 VWA3AA6NCI4 1184 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 SOBPA7XYQ1 873 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 CYB561D2O14569 222 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 RNF40O75150 1001 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 HAPLN1P10915 354 aaPredicted RBP22.31■■□□□ 1.16
CLIP2-208ENST00000491075 ABCD1P33897 745 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 NLRP12P59046 1061 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 MAB21L3Q8N8X9 362 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 USP13Q92995 863 aaPredicted RBP22.31■■□□□ 1.16
CLIP2-208ENST00000491075 EXOC4Q96A65 974 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 PYM1Q9BRP8 204 aaKnown RBP22.31■■□□□ 1.16
CLIP2-208ENST00000491075 CCSER1Q9C0I3 900 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 ASB7Q9H672 318 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 PARVGQ9HBI0 331 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 TDP1Q9NUW8 608 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 ABI2Q9NYB9 513 aaPredicted RBP22.31■■□□□ 1.16
CLIP2-208ENST00000491075 CCL26Q9Y258 94 aa22.31■■□□□ 1.16
CLIP2-208ENST00000491075 OTOL1A6NHN0 477 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 SLC26A4O43511 780 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 FAM13AO94988 1023 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 DRD1P21728 446 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 TAF6P49848 677 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 CDR1P51861 262 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 ZNF131P52739 623 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 KARSQ15046 597 aaKnown RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 FBXO43Q4G163 708 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 ARL6IP4Q66PJ3 421 aaKnown RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 TRIM68Q6AZZ1 485 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 CC2D1AQ6P1N0 951 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 SLC39A4Q6P5W5 647 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 TMEM150AQ86TG1 271 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 GPBP1Q86WP2 473 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 DCP1BQ8IZD4 617 aaKnown RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 MYCT1Q8N699 235 aa22.3■■□□□ 1.16
CLIP2-208ENST00000491075 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
CLIP2-208ENST00000491075 KIF3AQ9Y496 699 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms