RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SNW1Q13573 536 aaKnown RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 KNOP1Q1ED39 458 aaKnown RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 ITIH5Q86UX2 942 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 TMEM86AQ8N2M4 240 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 FAM200AQ8TCP9 573 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 ATOH1Q92858 354 aaPredicted RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 SMARCD2Q92925 531 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 SHDQ96IW2 340 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 LPIN3Q9BQK8 851 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 SLITRK6Q9H5Y7 841 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 ZNF334Q9HCZ1 680 aaPredicted RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 DDX43Q9NXZ2 648 aaKnown RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 CGNQ9P2M7 1197 aaKnown RBP33.72■■■□□ 2.99
LDB1-204ENST00000490751 ATF6P18850 670 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 STARD6P59095 220 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 MYO1EQ12965 1108 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 VEPH1Q14D04 833 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 MLF2Q15773 248 aaPredicted RBP33.71■■■□□ 2.99
LDB1-204ENST00000490751 C12orf56Q8IXR9 622 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 TOP6BLQ8N6T0 577 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 ZSCAN18Q8TBC5 510 aaPredicted RBP33.71■■■□□ 2.99
LDB1-204ENST00000490751 SCAND2PQ9GZW5 306 aaPredicted RBP33.71■■■□□ 2.99
LDB1-204ENST00000490751 TMLHEQ9NVH6 421 aa33.71■■■□□ 2.99
LDB1-204ENST00000490751 CACNA1HO95180 2353 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 DLATP10515 647 aaKnown RBP33.7■■■□□ 2.99
LDB1-204ENST00000490751 HAPLN1P10915 354 aaPredicted RBP33.7■■■□□ 2.99
LDB1-204ENST00000490751 SYKP43405 635 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 MYL7Q01449 175 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 CYP24A1Q07973 514 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 STK4Q13043 487 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 GRM2Q14416 872 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 PSMD6Q15008 389 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 KMT5BQ4FZB7 885 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 SLC44A4Q53GD3 710 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 OSTM1Q86WC4 334 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 DTWD2Q8NBA8 298 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 KIAA0895Q8NCT3 520 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 CCDC127Q96BQ5 260 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 HPDLQ96IR7 371 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 FNBP1Q96RU3 617 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 FOXQ1Q9C009 403 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 GPR88Q9GZN0 384 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 PCDHB5Q9Y5E4 795 aa33.7■■■□□ 2.99
LDB1-204ENST00000490751 TNNI1P19237 187 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 ACAT1P24752 427 aaKnown RBP33.69■■■□□ 2.98
LDB1-204ENST00000490751 NDUFA8P51970 172 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 PRKCQQ04759 706 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 ADGRF2Q8IZF7 708 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 SPATA18Q8TC71 538 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 CGRRF1Q99675 332 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 ACBD6Q9BR61 282 aa33.69■■■□□ 2.98
LDB1-204ENST00000490751 PIEZO1Q92508 2521 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 FAM237AA0A1B0GTK4 181 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 GABRR2P28476 465 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 VIPR2P41587 438 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 NFE2Q16621 373 aaPredicted RBP33.68■■■□□ 2.98
LDB1-204ENST00000490751 SOWAHAQ2M3V2 549 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 INTS6LQ5JSJ4 861 aaKnown RBP33.68■■■□□ 2.98
LDB1-204ENST00000490751 STXBP5Q5T5C0 1151 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 GAREM2Q75VX8 874 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 TRAPPC11Q7Z392 1133 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 GIPC2Q8TF65 315 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 ATXN3LQ9H3M9 355 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 SIT1Q9Y3P8 196 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 MIA3Q5JRA6 1907 aa33.68■■■□□ 2.98
LDB1-204ENST00000490751 FGF19O95750 216 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 MYL1P05976 194 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 DCNP07585 359 aaKnown RBP33.67■■■□□ 2.98
LDB1-204ENST00000490751 PSMD2Q13200 908 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 BECN1Q14457 450 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 VITQ6UXI7 678 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 PJA1Q8NG27 643 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 GOLGA5Q8TBA6 731 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 TRMT61BQ9BVS5 477 aaKnown RBP33.67■■■□□ 2.98
LDB1-204ENST00000490751 TRPV4Q9HBA0 871 aa33.67■■■□□ 2.98
LDB1-204ENST00000490751 EXOC3O60645 756 aa33.66■■■□□ 2.98
LDB1-204ENST00000490751 PRPF40AO75400 957 aaKnown RBP33.66■■■□□ 2.98
LDB1-204ENST00000490751 LHX1P48742 406 aa33.66■■■□□ 2.98
LDB1-204ENST00000490751 FSIP1Q8NA03 581 aa33.66■■■□□ 2.98
LDB1-204ENST00000490751 PI4K2AQ9BTU6 479 aa33.66■■■□□ 2.98
LDB1-204ENST00000490751 DDX23Q9BUQ8 820 aaKnown RBP33.66■■■□□ 2.98
LDB1-204ENST00000490751 BRD9Q9H8M2 597 aa33.66■■■□□ 2.98
LDB1-204ENST00000490751 NUP210Q8TEM1 1887 aaPredicted RBP33.65■■■□□ 2.98
LDB1-204ENST00000490751 NCANO14594 1321 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 A0A1W2PQ27 194 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 A0A1W2PQ64 194 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 A0A1W2PQD8 194 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 KANSL1LA0AUZ9 987 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 GABRDO14764 452 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 HCRTO43612 131 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 PSMC3P17980 439 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 TAF12Q16514 161 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 DPH6Q7L8W6 267 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 DEPDC1BQ8WUY9 529 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 DNASE1L2Q92874 299 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 PKMYT1Q99640 499 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 GZF1Q9H116 711 aaPredicted RBP33.65■■■□□ 2.98
LDB1-204ENST00000490751 GDPD2Q9HCC8 539 aa33.65■■■□□ 2.98
LDB1-204ENST00000490751 RPN1P04843 607 aaKnown RBP33.64■■■□□ 2.98
LDB1-204ENST00000490751 PRR29P0C7W0 189 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms