RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 CYB561D2O14569 222 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 XPOTO43592 962 aaKnown RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 F11P03951 625 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 SCP2P22307 547 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 LONP1P36776 959 aaKnown RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 PON2Q15165 354 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 RALGPS2Q86X27 583 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 STKLD1Q8NE28 680 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 CSGALNACT1Q8TDX6 532 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 DNAJC19Q96DA6 116 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 FAM83CQ9BQN1 747 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 TASP1Q9H6P5 420 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 HPS4Q9NQG7 708 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 CCL26Q9Y258 94 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
COL2A1-207ENST00000490609 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
COL2A1-207ENST00000490609 ZZEF1O43149 2961 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 HAPLN1P10915 354 aaPredicted RBP16.81■□□□□ 0.28
COL2A1-207ENST00000490609 GPR15P49685 360 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 ARHGAP29Q52LW3 1261 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
COL2A1-207ENST00000490609 ADALQ6DHV7 355 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 LAIR1Q6GTX8 287 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
COL2A1-207ENST00000490609 PKMYT1Q99640 499 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 SEPT5Q99719 369 aaPredicted RBP16.81■□□□□ 0.28
COL2A1-207ENST00000490609 FGFBP2Q9BYJ0 223 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 AGO2Q9UKV8 859 aaKnown RBP16.81■□□□□ 0.28
COL2A1-207ENST00000490609 KIF3AQ9Y496 699 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 CLIC4Q9Y696 253 aa16.81■□□□□ 0.28
COL2A1-207ENST00000490609 MYMKA6NI61 221 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 PRR5-ARHGAP8B1AHC4 643 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 PAX3P23760 479 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 TUFMP49411 452 aaKnown RBP16.8■□□□□ 0.28
COL2A1-207ENST00000490609 KPNA1P52294 538 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-207ENST00000490609 ARHGAP8P85298 464 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 CCDC142Q17RM4 750 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 SFR1Q86XK3 245 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 YAF2Q8IY57 180 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 BPIFB1Q8TDL5 484 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 MSANTD3Q96H12 275 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 CNTNAP3BQ96NU0 1288 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 PYM1Q9BRP8 204 aaKnown RBP16.8■□□□□ 0.28
COL2A1-207ENST00000490609 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 ZHX3Q9H4I2 956 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
COL2A1-207ENST00000490609 POLR3BQ9NW08 1133 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-207ENST00000490609 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
COL2A1-207ENST00000490609 ASPMQ8IZT6 3477 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 NUP205Q92621 2012 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 EXTL3O43909 919 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 GDF9O60383 454 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 TADA3O75528 432 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 RETP07949 1114 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 HOXA6P31267 233 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 TAF6P49848 677 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 CASP5P51878 434 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 NLRP12P59046 1061 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 POU5F1Q01860 360 aaKnown RBP16.79■□□□□ 0.28
COL2A1-207ENST00000490609 LMNB2Q03252 620 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 MGAT5BQ3V5L5 792 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 DGKKQ5KSL6 1271 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-207ENST00000490609 FSTL4Q6MZW2 842 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 DYMQ7RTS9 669 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 LONP2Q86WA8 852 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 CMTM8Q8IZV2 173 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 USP13Q92995 863 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-207ENST00000490609 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 FBXO2Q9UK22 296 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-207ENST00000490609 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
COL2A1-207ENST00000490609 MYO18AQ92614 2054 aaKnown RBP16.78■□□□□ 0.28
COL2A1-207ENST00000490609 A0A087X0B3 334 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 HCRTO43612 131 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 FGF19O95750 216 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-207ENST00000490609 LRRC32Q14392 662 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 TXNDC8Q6A555 127 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
COL2A1-207ENST00000490609 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 PRR23BQ6ZRT6 265 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 C1orf127Q8N9H9 656 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 EZH1Q92800 747 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-207ENST00000490609 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 GMEB2Q9UKD1 530 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 DSEQ9UL01 958 aa16.78■□□□□ 0.28
COL2A1-207ENST00000490609 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms