RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 VITQ6UXI7 678 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 DNAJB7Q7Z6W7 309 aaPredicted RBP11.14□□□□□ -0.63
RBM39-236ENST00000490484 LRRTM3Q86VH5 581 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 ADGRF2Q8IZF7 708 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 STKLD1Q8NE28 680 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 C2orf15Q8WU43 125 aaKnown RBP11.14□□□□□ -0.63
RBM39-236ENST00000490484 LEO1Q8WVC0 666 aaPredicted RBP11.14□□□□□ -0.63
RBM39-236ENST00000490484 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 ATXN3LQ9H3M9 355 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 BRD9Q9H8M2 597 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 HEBP1Q9NRV9 189 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 DDX43Q9NXZ2 648 aaKnown RBP11.14□□□□□ -0.63
RBM39-236ENST00000490484 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
RBM39-236ENST00000490484 COL4A2P08572 1712 aa11.14□□□□□ -0.63
RBM39-236ENST00000490484 TICRRQ7Z2Z1 1910 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 A0A1B0GVL5 298 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 KANSL1LA0AUZ9 987 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 CLIC2O15247 247 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 HCRTO43612 131 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 GFRA3O60609 400 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 PSMC3P17980 439 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 GDI1P31150 447 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 TUFMP49411 452 aaKnown RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 KRT85P78386 507 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 CYP4F8P98187 520 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 MYL7Q01449 175 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 SURF1Q15526 300 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 TAF12Q16514 161 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 CCDC142Q17RM4 750 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 BMT2Q1RMZ1 405 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 GAREM2Q75VX8 874 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 DCP1BQ8IZD4 617 aaKnown RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 TOP6BLQ8N6T0 577 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 RDH13Q8NBN7 331 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 SPPL2BQ8TCT7 592 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 GIPC2Q8TF65 315 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 DNASE1L2Q92874 299 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 CCDC127Q96BQ5 260 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 PAGE5Q96GU1 130 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 GCNAQ96QF7 691 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 TRMT61BQ9BVS5 477 aaKnown RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 KIAA1586Q9HCI6 787 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 LTB4R2Q9NPC1 389 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 TMLHEQ9NVH6 421 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 DLGAP2Q9P1A6 1054 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 ZDHHC9Q9Y397 364 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 MTF2Q9Y483 593 aaPredicted RBP11.13□□□□□ -0.63
RBM39-236ENST00000490484 ASB3Q9Y575 518 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 PCDHB5Q9Y5E4 795 aa11.13□□□□□ -0.63
RBM39-236ENST00000490484 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
RBM39-236ENST00000490484 PVALEFA0A1B0GWK0 134 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 HEPACAM2A8MVW5 462 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 FGF19O95750 216 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
RBM39-236ENST00000490484 GLULP15104 373 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 TNNI1P19237 187 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 NBL1P41271 181 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 GPR15P49685 360 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 CYP24A1Q07973 514 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
RBM39-236ENST00000490484 KNOP1Q1ED39 458 aaKnown RBP11.12□□□□□ -0.63
RBM39-236ENST00000490484 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 ARHGAP15Q53QZ3 475 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 INTS6LQ5JSJ4 861 aaKnown RBP11.12□□□□□ -0.63
RBM39-236ENST00000490484 GPR158Q5T848 1215 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 XXYLT1Q8NBI6 393 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 KIAA0895Q8NCT3 520 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 DEPDC1BQ8WUY9 529 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 RSPRY1Q96DX4 576 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 FNBP1Q96RU3 617 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 MKNK1Q9BUB5 465 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 GPR88Q9GZN0 384 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 EXOC1Q9NV70 894 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
RBM39-236ENST00000490484 FAM170BA6NMN3 283 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 ZNF263O14978 683 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 KLRC4O43908 158 aa11.11□□□□□ -0.63
RBM39-236ENST00000490484 EXOC3O60645 756 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms