RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
TTC28-207ENST00000490475 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 A0A1W2PQ27 194 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 A0A1W2PQ64 194 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 A0A1W2PQD8 194 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 ANKRD63C9JTQ0 380 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 CCR2P41597 374 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 SYKP43405 635 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 CASP5P51878 434 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 ASIC1P78348 528 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 KCNA1Q09470 495 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 FCHO2Q0JRZ9 810 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 CUL4BQ13620 913 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 GRM2Q14416 872 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 TEAD2Q15562 447 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 NFE2Q16621 373 aaPredicted RBP11.17□□□□□ -0.62
TTC28-207ENST00000490475 VITQ6UXI7 678 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
TTC28-207ENST00000490475 CCDC65Q8IXS2 484 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 CEP57L1Q8IYX8 460 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 ZBTB44Q8NCP5 570 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 EXOC4Q96A65 974 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 PGLYRP2Q96PD5 576 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 STRA6Q9BX79 667 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 PLA2G2FQ9BZM2 168 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 TMEM206Q9H813 350 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
TTC28-207ENST00000490475 DPP3Q9NY33 737 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 CHMP5Q9NZZ3 219 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 RAB23Q9ULC3 237 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 MTF2Q9Y483 593 aaPredicted RBP11.17□□□□□ -0.62
TTC28-207ENST00000490475 PIAS3Q9Y6X2 628 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 ANK1P16157 1881 aa11.17□□□□□ -0.62
TTC28-207ENST00000490475 NUP210Q8TEM1 1887 aaPredicted RBP11.17□□□□□ -0.62
TTC28-207ENST00000490475 SCN1AP35498 2009 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 A0A1W2PRU2 124 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 TISP43B9A030 160 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 CYB561D2O14569 222 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 MOSPD3O75425 235 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 ZNF202O95125 648 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 NFICP08651 508 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 CD72P21854 359 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 GARTP22102 1010 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 DDX6P26196 483 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC28-207ENST00000490475 ACOT2P49753 483 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 AMPD2Q01433 879 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 TSPY1Q01534 308 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 PUM1Q14671 1186 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC28-207ENST00000490475 MGAT5BQ3V5L5 792 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 DGKKQ5KSL6 1271 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 CNNM4Q6P4Q7 775 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 SLC39A4Q6P5W5 647 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 RALGPS2Q86X27 583 aaPredicted RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 TMC8Q8IU68 726 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 ARID3BQ8IVW6 561 aaPredicted RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 MAML2Q8IZL2 1156 aaPredicted RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 TMEM86AQ8N2M4 240 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 SYNPOQ8N3V7 929 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 ATAD1Q8NBU5 361 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 NELL1Q92832 810 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 LRRC3Q9BY71 257 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 EPC1Q9H2F5 836 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 ATXN3LQ9H3M9 355 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 TASP1Q9H6P5 420 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 MAGEF1Q9HAY2 307 aa11.16□□□□□ -0.62
TTC28-207ENST00000490475 UXTQ9UBK9 157 aaPredicted RBP11.16□□□□□ -0.62
TTC28-207ENST00000490475 CACNA1AO00555 2505 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 TICRRQ7Z2Z1 1910 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 FOXD2O60548 495 aaPredicted RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 LILRB5O75023 590 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 LRRN2O75325 713 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 PPP1R37O75864 691 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 PRPF6O94906 941 aaKnown RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 GCNT3O95395 438 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 OR4Q2P0C623 313 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 GABRR2P28476 465 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 CNR2P34972 360 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 VIPR2P41587 438 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 KPNA1P52294 538 aaPredicted RBP11.15□□□□□ -0.62
TTC28-207ENST00000490475 GSE1Q14687 1217 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 SURF1Q15526 300 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 SLC39A12Q504Y0 691 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 GPR158Q5T848 1215 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 SPEM1Q8N4L4 309 aa11.15□□□□□ -0.62
TTC28-207ENST00000490475 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms