RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CGRRF1Q99675 332 aa18.75■□□□□ 0.59
SEC13-218ENST00000490283 ACBD6Q9BR61 282 aa18.75■□□□□ 0.59
SEC13-218ENST00000490283 TBC1D17Q9HA65 648 aa18.75■□□□□ 0.59
SEC13-218ENST00000490283 DDX43Q9NXZ2 648 aaKnown RBP18.75■□□□□ 0.59
SEC13-218ENST00000490283 SIX4Q9UIU6 781 aa18.75■□□□□ 0.59
SEC13-218ENST00000490283 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
SEC13-218ENST00000490283 KRBA1A5PL33 1030 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 KLRC4O43908 158 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 RPN1P04843 607 aaKnown RBP18.74■□□□□ 0.59
SEC13-218ENST00000490283 NPR3P17342 541 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 TEAD2Q15562 447 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 ARHGAP15Q53QZ3 475 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 FAM78AQ5JUQ0 283 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 DPH6Q7L8W6 267 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 DNAJB7Q7Z6W7 309 aaPredicted RBP18.74■□□□□ 0.59
SEC13-218ENST00000490283 SMARCD2Q92925 531 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 FAM84AQ96KN4 292 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 ASB16Q96NS5 453 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 DNAJC25Q9H1X3 360 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 TRIOO75962 3097 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
SEC13-218ENST00000490283 FAM237AA0A1B0GTK4 181 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 A0A1W2PRU2 124 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 SOAT2O75908 522 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 CLSTN1O94985 981 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 GJA1P17302 382 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 STK4Q13043 487 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 TRPC3Q13507 836 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 PHLDB3Q6NSJ2 640 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 TRAPPC11Q7Z392 1133 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 KIAA0895Q8NCT3 520 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 SHKBP1Q8TBC3 707 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 ZSCAN18Q8TBC5 510 aaPredicted RBP18.73■□□□□ 0.59
SEC13-218ENST00000490283 E2F7Q96AV8 911 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 SCN1AP35498 2009 aa18.73■□□□□ 0.59
SEC13-218ENST00000490283 PHACTR2O75167 634 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 HAPLN1P10915 354 aaPredicted RBP18.72■□□□□ 0.59
SEC13-218ENST00000490283 CDC25CP30307 473 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 PRKCQQ04759 706 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 TCF15Q12870 199 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 MLF2Q15773 248 aaPredicted RBP18.72■□□□□ 0.59
SEC13-218ENST00000490283 INTS6LQ5JSJ4 861 aaKnown RBP18.72■□□□□ 0.59
SEC13-218ENST00000490283 TANGO2Q6ICL3 276 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 KRBA2Q6ZNG9 492 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 LRRTM3Q86VH5 581 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 TMC8Q8IU68 726 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 DEPDC1BQ8WUY9 529 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 ATOH1Q92858 354 aaPredicted RBP18.72■□□□□ 0.59
SEC13-218ENST00000490283 LPIN3Q9BQK8 851 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 ATXN3LQ9H3M9 355 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 TSC2P49815 1807 aa18.72■□□□□ 0.59
SEC13-218ENST00000490283 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 PDXKO00764 312 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 CALUO43852 315 aaPredicted RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 MOSPD3O75425 235 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 ZNF202O95125 648 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 ACAT1P24752 427 aaKnown RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 GABRR2P28476 465 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 CDR1P51861 262 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 AP3M2P53677 418 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 RPL10AP62906 217 aaKnown RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 TNNC1P63316 161 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 SNW1Q13573 536 aaKnown RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 SOWAHAQ2M3V2 549 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 SLC44A4Q53GD3 710 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 SPATA2LQ8IUW3 424 aaPredicted RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 GIPC2Q8TF65 315 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 TRMT61BQ9BVS5 477 aaKnown RBP18.71■□□□□ 0.59
SEC13-218ENST00000490283 LRRC3Q9BY71 257 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 BRD9Q9H8M2 597 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 FRMD4BQ9Y2L6 1034 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 SIT1Q9Y3P8 196 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 KMT2EQ8IZD2 1858 aa18.71■□□□□ 0.59
SEC13-218ENST00000490283 DPYSL4O14531 572 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 PSMC3P17980 439 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 ATF6P18850 670 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 FCARP24071 287 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 BIRC3Q13489 604 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 GRM2Q14416 872 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
SEC13-218ENST00000490283 C4orf50Q6ZRC1 276 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 SLC9A9Q8IVB4 645 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 YAF2Q8IY57 180 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 CCDC105Q8IYK2 499 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 DNASE1L2Q92874 299 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 IRF7Q92985 503 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
SEC13-218ENST00000490283 ZSWIM3Q96MP5 696 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 PLA2G2FQ9BZM2 168 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 TRPV4Q9HBA0 871 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 CDH9Q9ULB4 789 aa18.7■□□□□ 0.58
SEC13-218ENST00000490283 NOTCH4Q99466 2003 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 TCHHQ07283 1943 aa18.69■□□□□ 0.58
SEC13-218ENST00000490283 KANSL1LA0AUZ9 987 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms