RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 BMPR1AP36894 532 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 VIPR2P41587 438 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 TOB1P50616 345 aaPredicted RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 ANXA11P50995 505 aaKnown RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 WNT3P56703 355 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 RESTQ13127 1097 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 DAG1Q14118 895 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 CYP2A13Q16696 494 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 LONRF3Q496Y0 759 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 TAF2Q6P1X5 1199 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 DPP9Q86TI2 863 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 MICU3Q86XE3 530 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 CACTINQ8WUQ7 758 aaKnown RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 GJA10Q969M2 543 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 SLC46A1Q96NT5 459 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 MPHOSPH6Q99547 160 aaKnown RBP4.81□□□□□ -1.64
CD46-216ENST00000490278 HEPHQ9BQS7 1158 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 BRIP1Q9BX63 1249 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 ALOXE3Q9BYJ1 711 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 NLRC4Q9NPP4 1024 aa4.81□□□□□ -1.64
CD46-216ENST00000490278 A0A1W2PS29 197 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 MYADML2A6NDP7 307 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 MBD3L4A6NDZ8 208 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 MBD3L3A6NE82 208 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 POM121BA6NF01 834 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 TMEM233B4DJY2 109 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 RASA4BC9J798 803 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 F8W8V4 182 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 RASA4O43374 803 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 SOAT2O75908 522 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 CDKL5O76039 1030 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 ZFPL1O95159 310 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 PARP1P09874 1014 aaKnown RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD46-216ENST00000490278 CHRM3P20309 590 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 KLRC1P26715 233 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 STT3AP46977 705 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 GCLCP48506 637 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 RPS7P62081 194 aaKnown RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 MC2RQ01718 297 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 FPGSQ05932 587 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 OS9Q13438 667 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 BIRC2Q13490 618 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 DYRK1AQ13627 763 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 IQCB1Q15051 598 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 PREPLQ4J6C6 727 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 DCAF12L1Q5VU92 463 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 TMPRSS9Q7Z410 1059 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 SRLQ86TD4 932 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 FAM186BQ8IYM0 893 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 OR56A3Q8NH54 315 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 NACC2Q96BF6 587 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 RPS6KC1Q96S38 1066 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 GPR20Q99678 358 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 MS4A7Q9GZW8 240 aaPredicted RBP4.8□□□□□ -1.64
CD46-216ENST00000490278 GALNT9Q9HCQ5 603 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 TMEM74BQ9NUR3 256 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 FZD1Q9UP38 647 aa4.8□□□□□ -1.64
CD46-216ENST00000490278 TMEM200CA6NKL6 621 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
CD46-216ENST00000490278 TSHRP16473 764 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ITGALP20701 1170 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 PTGS2P35354 604 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 HTR3AP46098 478 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 VAV2P52735 878 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SATB1Q01826 763 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 FOXE3Q13461 319 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 GEN1Q17RS7 908 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
CD46-216ENST00000490278 TIGD2Q4W5G0 525 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 LAYNQ6UX15 382 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 MICALCLQ6ZW33 695 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 MORC1Q86VD1 984 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 COLGALT2Q8IYK4 626 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ADGRG5Q8IZF4 528 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SYNE4Q8N205 404 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 CCDC33Q8N5R6 958 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SNX19Q92543 992 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 HAS1Q92839 578 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 TMEM125Q96AQ2 219 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ZNF503Q96F45 646 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ZC3H10Q96K80 434 aaKnown RBP4.79□□□□□ -1.64
CD46-216ENST00000490278 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 ADAM2Q99965 735 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 MESP1Q9BRJ9 268 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
CD46-216ENST00000490278 SMOC2Q9H3U7 446 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms