RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 PDCL2Q8N4E4 241 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 NELL1Q92832 810 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 DHX58Q96C10 678 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 RSPRY1Q96DX4 576 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ACBD6Q9BR61 282 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 PYM1Q9BRP8 204 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 TRMT61BQ9BVS5 477 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 FOXQ1Q9C009 403 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 KIAA1586Q9HCI6 787 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF334Q9HCZ1 680 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 INTS13Q9NVM9 706 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ITGA11Q9UKX5 1188 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 CFAP45Q9UL16 551 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 AGAP1Q9UPQ3 857 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 ZDHHC9Q9Y397 364 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 MTF2Q9Y483 593 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 NCANO14594 1321 aa10.48□□□□□ -0.73
TMEM39A-210ENST00000490099 GPR179Q6PRD1 2367 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM237AA0A1B0GTK4 181 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 GOLGA8IPA6NC78 632 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF233A6NK53 670 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 GOLGA8JA6NMD2 632 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM170BA6NMN3 283 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 GFRA3O60609 400 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 FGF19O95750 216 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ITGB3P05106 788 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 DCNP07585 359 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 HMGA1P17096 107 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 GJA1P17302 382 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 VIPR2P41587 438 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 RBP5P82980 135 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 SURF1Q15526 300 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM26FQ5R3K3 315 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM150AQ86TG1 271 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ITIH5Q86UX2 942 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 CBWD2Q8IUF1 395 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 C1orf210Q8IVY1 113 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 MFSD6LQ8IWD5 586 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 TMEM86AQ8N2M4 240 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 CSGALNACT2Q8N6G5 542 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 TOP6BLQ8N6T0 577 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ZSCAN18Q8TBC5 510 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 SPPL2BQ8TCT7 592 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 IRF7Q92985 503 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF560Q96MR9 790 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 SEMA4AQ9H3S1 761 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 PCIF1Q9H4Z3 704 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 ABCB6Q9NP58 842 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 TMLHEQ9NVH6 421 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 OBP2AQ9NY56 170 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 HSPBP1Q9NZL4 362 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 PTPRJQ12913 1337 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 OTOGLQ3ZCN5 2332 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 TSC2P49815 1807 aa10.47□□□□□ -0.73
TMEM39A-210ENST00000490099 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 PRR23AA6NEV1 266 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 HEPACAM2A8MVW5 462 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 KLRC4O43908 158 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 LRRN2O75325 713 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 SOAT2O75908 522 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM163BP0C2L3 166 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 SLFN14P0C7P3 912 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 CMA1P23946 247 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 MAGEA9P43362 315 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 RPS9P46781 194 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 ASIC1P78348 528 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 CLDN10P78369 228 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 DNM1Q05193 864 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 NFE2Q16621 373 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 DUOXA2Q1HG44 320 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 SOWAHAQ2M3V2 549 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF528Q3MIS6 628 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM171BQ6P995 826 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 ZNF852Q6ZMS4 543 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FRMD5Q7Z6J6 570 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 WDR49Q8IV35 697 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 ARID3BQ8IVW6 561 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 DCP1BQ8IZD4 617 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 FAM84AQ96KN4 292 aa10.46□□□□□ -0.73
TMEM39A-210ENST00000490099 MYRFLQ96LU7 910 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms