RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
TRAIP-210ENST00000489948 ELOVL4Q9GZR5 314 aa14.24□□□□□ -0.13
TRAIP-210ENST00000489948 CHST7Q9NS84 486 aa14.24□□□□□ -0.13
TRAIP-210ENST00000489948 ARHGAP20Q9P2F6 1191 aa14.24□□□□□ -0.13
TRAIP-210ENST00000489948 NOCTQ9UK39 431 aaKnown RBP14.24□□□□□ -0.13
TRAIP-210ENST00000489948 LZTS1Q9Y250 596 aa14.24□□□□□ -0.13
TRAIP-210ENST00000489948 CDH23Q9H251 3354 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 A8MXQ7 604 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 NT5C1B-RDH14C9J2C7 533 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 NRDCO43847 1150 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 RB1P06400 928 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 BMPR1AP36894 532 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 GNL1P36915 607 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 CCZ1BP86790 482 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 UBE3AQ05086 875 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 KLHL30Q0D2K2 578 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 HABP4Q5JVS0 413 aaKnown RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 ZNF280DQ6N043 979 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 ANKS3Q6ZW76 656 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 SLC47A2Q86VL8 602 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 OR6B3Q8NGW1 331 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 PIK3R5Q8WYR1 880 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 DDX1Q92499 740 aaKnown RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 BAG1Q99933 345 aaPredicted RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 TTPALQ9BTX7 342 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 DDX43Q9NXZ2 648 aaKnown RBP14.23□□□□□ -0.13
TRAIP-210ENST00000489948 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
TRAIP-210ENST00000489948 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 OR6C75A6NL08 312 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 FGF18O76093 207 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 CA3P07451 260 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 VDRP11473 427 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 CTNNB1P35222 781 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 USP8P40818 1118 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 RABGGTBP53611 331 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 CDR2Q01850 454 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 DSG1Q02413 1049 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 KRT17Q04695 432 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 HS1BP3Q53T59 392 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 TDRD12Q587J7 1177 aaKnown RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 INTS6LQ5JSJ4 861 aaKnown RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 RTP2Q5QGT7 225 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 NOP9Q86U38 636 aaKnown RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 PKMYT1Q99640 499 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 ZBP1Q9H171 429 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 HAUS4Q9H6D7 363 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 PCDHGC3Q9UN70 934 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 BACE2Q9Y5Z0 518 aa14.22□□□□□ -0.13
TRAIP-210ENST00000489948 COL4A4P53420 1690 aaPredicted RBP14.22□□□□□ -0.13
TRAIP-210ENST00000489948 ATP8B3O60423 1300 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 GRXCR1A8MXD5 290 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 H7C4K7 107 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 O00370 1275 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ARHGAP6O43182 974 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 MED7O43513 233 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ARHGEF15O94989 841 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 LMO2P25791 158 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 GLUD2P49448 558 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ERVK-21P61565 698 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 SMAD3P84022 425 aaKnown RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 CREMQ03060 361 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ARID5AQ03989 594 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ZNF394Q53GI3 561 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 SGO2Q562F6 1265 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 FAM171BQ6P995 826 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ZNF571Q7Z3V5 609 aaPredicted RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 VPS36Q86VN1 386 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 TGS1Q96RS0 853 aaKnown RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 C11orf84Q9BUA3 381 aaPredicted RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 KCNF1Q9H3M0 494 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 DPEP3Q9H4B8 488 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 MTRRQ9UBK8 725 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 SSX2IPQ9Y2D8 614 aa14.21□□□□□ -0.13
TRAIP-210ENST00000489948 YBX2Q9Y2T7 364 aaKnown RBP14.21□□□□□ -0.13
TRAIP-210ENST00000489948 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.14
TRAIP-210ENST00000489948 THAP12O43422 761 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 HCRTO43612 131 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 LCA5LO95447 670 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 LSM8O95777 96 aaKnown RBP14.2□□□□□ -0.14
TRAIP-210ENST00000489948 URODP06132 367 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms