RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LIASO43766 372 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 IL1R2P27930 398 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 OAZ1P54368 228 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■■ 28.9
BRD9-208ENST00000489816 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
BRD9-208ENST00000489816 CDO1Q16878 200 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 CYB5D1Q6P9G0 228 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 KATNAL2Q8IYT4 538 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 EXD1Q8NHP7 514 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
BRD9-208ENST00000489816 VPS33BQ9H267 617 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 TXNRD2Q9NNW7 524 aa16.59■□□□□ 0.25
BRD9-208ENST00000489816 PSTPIP1O43586 416 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 PDIA2Q13087 525 aaKnown RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SPOCD1Q6ZMY3 1216 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 TMEM35BQ8NCS4 154 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 TWNKQ96RR1 684 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 CALN1Q9BXU9 219 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SPATC1LQ9H0A9 340 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 STMN4Q9H169 189 aaPredicted RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 ALG13Q9NP73 1137 aaKnown RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 SLCO1B3Q9NPD5 702 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SCINQ9Y6U3 715 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 FZD9O00144 591 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 ATG7O95352 703 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SSTR1P30872 391 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 LBX2Q6XYB7 198 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 TRPM8Q7Z2W7 1104 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 CPB2Q96IY4 423 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SERPINB12Q96P63 405 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 ACO2Q99798 780 aaKnown RBP16.58■□□□□ 0.24
BRD9-208ENST00000489816 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
BRD9-208ENST00000489816 SNX3O60493 162 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 CST8O60676 142 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 KLRC2P26717 231 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 CETN2P41208 172 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 PIGWQ7Z7B1 504 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 MAIP1Q8WWC4 291 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 CENPTQ96BT3 561 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 STK38LQ9Y2H1 464 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 EVPLQ92817 2033 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 A0A1W2PPM1 405 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 NFICP08651 508 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 TARBP2Q15633 366 aaKnown RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 ANKRD22Q5VYY1 191 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 ZC3H18Q86VM9 953 aaKnown RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 ACTL9Q8TC94 416 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 C12orf42Q96LP6 360 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 TJP3O95049 919 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 KRT3P12035 628 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 MMRN1Q13201 1228 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 SLCO2A1Q92959 643 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 NIFKQ9BYG3 293 aaKnown RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 ROPN1BQ9BZX4 212 aaPredicted RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 RNPEPQ9H4A4 650 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 ROPN1Q9HAT0 212 aaPredicted RBP16.57■□□□□ 0.24
BRD9-208ENST00000489816 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
BRD9-208ENST00000489816 OGTO15294 1046 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 RASSF9O75901 435 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 FOXN2P32314 431 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 GCLCP48506 637 aaPredicted RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 KCNJ2P63252 427 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 OTUD4Q01804 1114 aaKnown RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 MFSD5Q6N075 450 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRD9-208ENST00000489816 RMDN2Q96LZ7 410 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 METTL5Q9NRN9 209 aaKnown RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 TCRBV7S3A2A0A539 114 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 ITGB3P05106 788 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 TNFAIP8L3Q5GJ75 292 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 ATF7IP2Q5U623 682 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 APOBEC3FQ8IUX4 373 aaKnown RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 NKIRAS1Q9NYS0 192 aa16.56■□□□□ 0.24
BRD9-208ENST00000489816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.56■□□□□ 0.242e-7■■■□□ 15.9
BRD9-208ENST00000489816 TNS1Q9HBL0 1735 aaKnown RBP16.56■□□□□ 0.24
BRD9-208ENST00000489816 FAM189A1O60320 539 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 STAM2O75886 525 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 HOXC6P09630 235 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 MKRN3Q13064 507 aaKnown RBP16.55■□□□□ 0.24
BRD9-208ENST00000489816 FAM160B1Q5W0V3 765 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 NPNTQ6UXI9 565 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms