RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TMEM253P0C7T8 217 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 BRD2P25440 801 aaKnown RBP15.06■□□□□ 0
VPS26A-205ENST00000489656 GALCP54803 685 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 NOMO3P69849 1222 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 RNASELQ05823 741 aaKnown RBP15.06■□□□□ 0
VPS26A-205ENST00000489656 PPIGQ13427 754 aaKnown RBP eCLIP15.06■□□□□ 0
VPS26A-205ENST00000489656 TCEAL1Q15170 157 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 CNGA2Q16280 664 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 SGO2Q562F6 1265 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 ACAD10Q6JQN1 1059 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 LRRC43Q8N309 656 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 RNF10Q8N5U6 811 aaKnown RBP15.06■□□□□ 0
VPS26A-205ENST00000489656 TOP1MTQ969P6 601 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 SUSD3Q96L08 255 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 C16orf45Q96MC5 204 aaPredicted RBP15.06■□□□□ 0
VPS26A-205ENST00000489656 FAM193BQ96PV7 902 aaPredicted RBP15.06■□□□□ 0
VPS26A-205ENST00000489656 PACSIN1Q9BY11 444 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 LHX5Q9H2C1 402 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 SNX25Q9H3E2 840 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 TAS2R14Q9NYV8 317 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 PRKAG2Q9UGJ0 569 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 DSEQ9UL01 958 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 STXBP5LQ9Y2K9 1186 aa15.06■□□□□ 0
VPS26A-205ENST00000489656 O00370 1275 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 KIF5CO60282 957 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 DGKIO75912 1065 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 KIF4AO95239 1232 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 ABL1P00519 1130 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 FTLP02792 175 aaPredicted RBP15.05■□□□□ -0
VPS26A-205ENST00000489656 ODC1P11926 461 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 CD19P15391 556 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 TYMPP19971 482 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 IGFBP6P24592 240 aaPredicted RBP15.05■□□□□ -0
VPS26A-205ENST00000489656 GNL1P36915 607 aaPredicted RBP15.05■□□□□ -0
VPS26A-205ENST00000489656 LHX1P48742 406 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 ETF1P62495 437 aaKnown RBP15.05■□□□□ -0
VPS26A-205ENST00000489656 ARHGAP17Q68EM7 881 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 DSTYKQ6XUX3 929 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 OSTM1Q86WC4 334 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 OR6B3Q8NGW1 331 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 VCPIP1Q96JH7 1222 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 PDCL3Q9H2J4 239 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 NRDE2Q9H7Z3 1164 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 PUF60Q9UHX1 559 aaKnown RBP15.05■□□□□ -0
VPS26A-205ENST00000489656 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.05■□□□□ -0
VPS26A-205ENST00000489656 TFR2Q9UP52 801 aa15.05■□□□□ -0
VPS26A-205ENST00000489656 GBF1Q92538 1859 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TBKBP1A7MCY6 615 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 A8MXQ7 604 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TMCO5BA8MYB1 307 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 CFHP08603 1231 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TNNT1P13805 278 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 GATMP50440 423 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 WDR5P61964 334 aaKnown RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 WSCD1Q658N2 575 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 LCLAT1Q6UWP7 414 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 PHF13Q86YI8 300 aaPredicted RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 CTNNBL1Q8WYA6 563 aaPredicted RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 ZNF689Q96CS4 500 aaPredicted RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 CYFIP2Q96F07 1278 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TRIM11Q96F44 468 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TNIP3Q96KP6 325 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 HEXIM2Q96MH2 286 aaKnown RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 RC3H2Q9HBD1 1191 aaKnown RBP15.04■□□□□ -0
VPS26A-205ENST00000489656 DNAJB4Q9UDY4 337 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 TRIM10Q9UDY6 481 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 GUCA1BQ9UMX6 200 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 PCDHB8Q9UN66 801 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 CEP83Q9Y592 693 aa15.04■□□□□ -0
VPS26A-205ENST00000489656 ITGB1P05556 798 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 MYBL1P10243 752 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
VPS26A-205ENST00000489656 BRCC3P46736 316 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 OR1G1P47890 313 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
VPS26A-205ENST00000489656 GPC5P78333 572 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 FPGSQ05932 587 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 ORC1Q13415 861 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 NAA35Q5VZE5 725 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 MON1BQ7L1V2 547 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 ACOT1Q86TX2 421 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 TMEM35BQ8NCS4 154 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 RFFLQ8WZ73 363 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 SECISBP2LQ93073 1101 aaKnown RBP15.03■□□□□ -0
VPS26A-205ENST00000489656 COLEC11Q9BWP8 271 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 AVENQ9NQS1 362 aaPredicted RBP15.03■□□□□ -0
VPS26A-205ENST00000489656 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 DUSP10Q9Y6W6 482 aa15.03■□□□□ -0
VPS26A-205ENST00000489656 CARNS1A5YM72 827 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 NRP1O14786 923 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 SYN3O14994 580 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 TRAPPC3O43617 180 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 MTA2O94776 668 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 MICAL2O94851 1124 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 ALDH2P05091 517 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 CYP1A2P05177 515 aa15.02■□□□□ -0
VPS26A-205ENST00000489656 SETSIPP0DME0 302 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms