RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SLC27A5Q9Y2P5 690 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 ZFP37Q9Y6Q3 630 aaPredicted RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 SCN1AP35498 2009 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 DCXO43602 365 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 VNN1O95497 513 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 EPHB3P54753 998 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 ZNF699Q32M78 642 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 ZNF667Q5HYK9 610 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.57
MDC1-206ENST00000489540 KLHL10Q6JEL2 608 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 NELFBQ8WX92 580 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 KHSRPQ92945 711 aaKnown RBP eCLIP18.58■□□□□ 0.57
MDC1-206ENST00000489540 CEP63Q96MT8 703 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 SNX25Q9H3E2 840 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 EPS15L1Q9UBC2 864 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 NXF1Q9UBU9 619 aaKnown RBP18.58■□□□□ 0.57
MDC1-206ENST00000489540 LIMD1Q9UGP4 676 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 CDH9Q9ULB4 789 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 YIPF1Q9Y548 306 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 PCDHB5Q9Y5E4 795 aa18.58■□□□□ 0.57
MDC1-206ENST00000489540 TRIM49BA6NDI0 452 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 ZNF197O14709 1029 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 RHOP08100 348 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 TRIM49P0CI25 452 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 TRIM49CP0CI26 452 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 P4HA1P13674 534 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 GNL1P36915 607 aaPredicted RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 GCLMP48507 274 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 NTHL1P78549 312 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 PPP3CAQ08209 521 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 FILIP1Q7Z7B0 1213 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 OSTM1Q86WC4 334 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 LEMD2Q8NC56 503 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 KBTBD7Q8WVZ9 684 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 CRISPLD1Q9H336 500 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 METTL14Q9HCE5 456 aaKnown RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 TMEM8AQ9HCN3 771 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 HCFC1R1Q9NWW0 138 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 CEP72Q9P209 647 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 MUTYHQ9UIF7 546 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 ASB3Q9Y575 518 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 N4BP1O75113 896 aaKnown RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 ACAT1P24752 427 aaKnown RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 MAPRE1Q15691 268 aaKnown RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 MGAT5BQ3V5L5 792 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 CYP4A22Q5TCH4 519 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 KRT39Q6A163 491 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 TTI2Q6NXR4 508 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 MYADMQ96S97 322 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 CORO1BQ9BR76 489 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 C1QTNF1Q9BXJ1 281 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 EPHX3Q9H6B9 360 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 ABCB6Q9NP58 842 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 CDH7Q9ULB5 785 aa18.57■□□□□ 0.56
MDC1-206ENST00000489540 MRPS23Q9Y3D9 190 aaKnown RBP18.57■□□□□ 0.56
MDC1-206ENST00000489540 MTCL1Q9Y4B5 1905 aaKnown RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 MICAL2O94851 1124 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 CLSTN1O94985 981 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 ASS1P00966 412 aaKnown RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 HLA-DRAP01903 254 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 PDGFRBP09619 1106 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 HAPLN1P10915 354 aaPredicted RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 LAMP2P13473 410 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 LMO2P25791 158 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 PIK3CAP42336 1068 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 PAK1Q13153 545 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 FAM171BQ6P995 826 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 CCDC150Q8NCX0 1101 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 OR6B3Q8NGW1 331 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 ITFG1Q8TB96 612 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 NXPE3Q969Y0 559 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 PKMYT1Q99640 499 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 SEPT5Q99719 369 aaPredicted RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 DUSP9Q99956 384 aaKnown RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 SYT15Q9BQS2 421 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 MRPL45Q9BRJ2 306 aaKnown RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 IMPG2Q9BZV3 1241 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 NUP62CLQ9H1M0 184 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 TMLHEQ9NVH6 421 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 ABI2Q9NYB9 513 aaPredicted RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 IGSF9Q9P2J2 1179 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 ARMCX3Q9UH62 379 aaPredicted RBP18.56■□□□□ 0.56
MDC1-206ENST00000489540 GTF3C4Q9UKN8 822 aa18.56■□□□□ 0.56
MDC1-206ENST00000489540 PTPN21Q16825 1174 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
MDC1-206ENST00000489540 FRMD5Q7Z6J6 570 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 MLKLQ8NB16 471 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 FGF13Q92913 245 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 FUBP3Q96I24 572 aaKnown RBP eCLIP18.55■□□□□ 0.56
MDC1-206ENST00000489540 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 ASAH2Q9NR71 780 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 CTNND2Q9UQB3 1225 aa18.55■□□□□ 0.56
MDC1-206ENST00000489540 MYBPHLA2RUH7 354 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
MDC1-206ENST00000489540 GNA14O95837 355 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 EPHA5P54756 1037 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 VEPH1Q14D04 833 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 CFAP221Q4G0U5 840 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms