RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TMEM132DQ14C87 1099 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ACAP1Q15027 740 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PPP2R2DQ66LE6 453 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 TMEM270Q6UE05 265 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CRELD2Q6UXH1 353 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CATSPER4Q7RTX7 472 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CROCCP2Q86T23 111 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 NT5DC3Q86UY8 548 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PHF13Q86YI8 300 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ARHGEF19Q8IW93 802 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 RASGEF1CQ8N431 466 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 LRRC71Q8N4P6 559 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 C7orf31Q8N865 590 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PCSK9Q8NBP7 692 aaKnown RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 BEST2Q8NFU1 509 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PLEKHO2Q8TD55 490 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 WHAMMQ8TF30 809 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 LRRN4Q8WUT4 740 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 RSPH1Q8WYR4 309 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 SEMA4DQ92854 862 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF653Q96CK0 615 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF560Q96MR9 790 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 KCTD15Q96SI1 283 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 MTG1Q9BT17 334 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 TRIM6Q9C030 488 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 LHX5Q9H2C1 402 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 IFT122Q9HBG6 1241 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ABCB6Q9NP58 842 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CHST12Q9NRB3 414 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PARVAQ9NVD7 372 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 STIM2Q9P246 746 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 TRIM10Q9UDY6 481 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 DUSP10Q9Y6W6 482 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 V9GYY5 206 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ARID2Q68CP9 1835 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 MROH7Q68CQ1 1323 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 LRRC37A2A6NM11 1700 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 A0A087WZ62 844 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 HAS3O00219 553 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ABLIM1O14639 778 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 TLR3O15455 904 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 PSTPIP1O43586 416 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 SPOPO43791 374 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CEP104O60308 925 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FAM189A1O60320 539 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 HMGCRP04035 888 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CYP1A1P04798 512 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 INHAP05111 366 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 WEE2P0C1S8 567 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF865P0CJ78 1059 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 STAG3L1P0CL83 205 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 SETSIPP0DME0 302 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RARBP10826 455 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 HARSP12081 509 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 UNGP13051 313 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 DARSP14868 501 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ZSCAN20P17040 1043 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ABCB4P21439 1286 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CTNNA2P26232 953 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 GJA8P48165 433 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RAB27AP51159 221 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RWDD2BP57060 319 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 IGBP1P78318 339 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FMO1Q01740 532 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 PIGHQ14442 188 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 NR6A1Q15406 480 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ODF2Q5BJF6 829 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 LRRC38Q5VT99 294 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CC2D1AQ6P1N0 951 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 GJB7Q6PEY0 223 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 SYDE1Q6ZW31 735 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 NOP9Q86U38 636 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RPAINQ86UA6 219 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 UNC93AQ86WB7 457 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 TRIM50Q86XT4 487 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 THNSL1Q8IYQ7 743 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 KIAA0319LQ8IZA0 1049 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 MCOLN2Q8IZK6 566 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RBBP8NLQ8NC74 664 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 NPLOC4Q8TAT6 608 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 LNX1Q8TBB1 728 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF564Q8TBZ8 553 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 RAET1EQ8TD07 263 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CCHCR1Q8TD31 782 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 GRK7Q8WTQ7 553 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 COPS5Q92905 334 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 LRRC45Q96CN5 670 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CAPZA3Q96KX2 299 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 KREMEN1Q96MU8 473 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 MMS19Q96T76 1030 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms