RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FGGP02679 453 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 MMEP08473 750 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 CLTAP09496 248 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 TXNP10599 105 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 NSFP46459 744 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 PEX5P50542 639 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 CDK7P50613 346 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 EIF3BP55884 814 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 NLRP11P59045 1033 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 NOP14P78316 857 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 SLC7A5Q01650 507 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 LAMTOR4Q0VGL1 99 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 BIRC3Q13489 604 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PCBP1Q15365 356 aaKnown RBP eCLIP9□□□□□ -0.97
VTI1A-207ENST00000489357 KCNA10Q16322 511 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 LY6KQ17RY6 165 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 SGSM1Q2NKQ1 1148 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 MPZL3Q6UWV2 235 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PALB2Q86YC2 1186 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 MCOLN2Q8IZK6 566 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PRPF31Q8WWY3 499 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 COPS5Q92905 334 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 SPATA33Q96N06 139 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PCDHB18PQ96TA0 734 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 ACO2Q99798 780 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 NUP85Q9BW27 656 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 TARS2Q9BW92 718 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 SEZ6LQ9BYH1 1024 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 FZD8Q9H461 694 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PRMT7Q9NVM4 692 aaPredicted RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 TAS2R14Q9NYV8 317 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 CPSF3Q9UKF6 684 aaKnown RBP9□□□□□ -0.97
VTI1A-207ENST00000489357 TNFSF13BQ9Y275 285 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 GOLGA6CA6NDK9 693 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GOLGA6L10A6NI86 522 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 SRRM3A6NNA2 597 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 HMGB1P1B2RPK0 211 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 AGPSO00116 658 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 NDC80O14777 642 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 DYNC1LI2O43237 492 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 SIAH2O43255 324 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PSTPIP1O43586 416 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 SPOPO43791 374 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 SHOX2O60902 331 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PHACTR2O75167 634 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GH1P01241 217 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRKCBP05771 671 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 IVLP07476 585 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GOLGA6DP0CG33 693 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 KRT5P13647 590 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ACO1P21399 889 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 COMTP21964 271 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CETN2P41208 172 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PHKA2P46019 1235 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CARSP49589 748 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF132P52740 706 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ACLYP53396 1101 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRR20EP86478 221 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRR20CP86479 221 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRR20DP86480 221 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRR20BP86481 221 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PRR20AP86496 221 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 DR1Q01658 176 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 NCOA4Q13772 614 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PLCB4Q15147 1175 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 FSCN1Q16658 493 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 DCAF12L1Q5VU92 463 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 LEKR1Q6ZMV7 388 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 RUFY4Q6ZNE9 571 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 TRIM67Q6ZTA4 783 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 TRMT1LQ7Z2T5 733 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 APBB1IPQ7Z5R6 666 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 RNF180Q86T96 592 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 TLK2Q86UE8 772 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 KLHL7Q8IXQ5 586 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 UBR7Q8N806 425 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PCSK9Q8NBP7 692 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PPTC7Q8NI37 304 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 FAM76AQ8TAV0 307 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CASKIN2Q8WXE0 1202 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ALG3Q92685 438 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 DPF3Q92784 378 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 KAT5Q92993 513 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 POP1Q99575 1024 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 C11orf49Q9H6J7 331 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 PTPRHQ9HD43 1115 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ST7Q9NRC1 585 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GOLGA6AQ9NYA3 693 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 SMARCAL1Q9NZC9 954 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 EHD2Q9NZN4 543 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CWC15Q9P013 229 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CALCOCO1Q9P1Z2 691 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms