RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GNAI2P04899 355 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 RHOP08100 348 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 CHRM2P08172 466 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 IL12RB1P42701 662 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 RARRES1P49788 294 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 ZNF134P52741 427 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 MAPK10P53779 464 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 TUBB3Q13509 450 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 GTF2H3Q13889 308 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 TXNRD1Q16881 649 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 VPS53Q5VIR6 699 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 PEG10Q86TG7 708 aaKnown RBP4.7□□□□□ -1.66
RFC4-213ENST00000489028 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
RFC4-213ENST00000489028 JDP2Q8WYK2 163 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 SLC9A6Q92581 669 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 FBXL20Q96IG2 436 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 BBC3Q96PG8 261 aaPredicted RBP4.7□□□□□ -1.66
RFC4-213ENST00000489028 RIOX1Q9H6W3 641 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 LRIT1Q9P2V4 623 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 HESX1Q9UBX0 185 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 SPATA31A3Q5VYP0 1347 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 ADGRA2Q96PE1 1338 aa4.7□□□□□ -1.66
RFC4-213ENST00000489028 A0A088AWK7 358 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 F5H697 171 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 MPPED1O15442 326 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 NPR1P16066 1061 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 GCLCP48506 637 aaPredicted RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 KHDC1LQ5JSQ8 128 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 RBM20Q5T481 1227 aaKnown RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 FAM102BQ5T8I3 360 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 FAM160B1Q5W0V3 765 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 SWSAP1Q6NVH7 229 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 CHPFQ8IZ52 775 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 FAM109AQ8N4B1 249 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 SLC46A1Q96NT5 459 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 P2RX7Q99572 595 aaKnown RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 AMBRA1Q9C0C7 1298 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 ZMAT3Q9HA38 289 aaKnown RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 ATP6V0A4Q9HBG4 840 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 SERHLQ9NQF3 203 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 IL17RBQ9NRM6 502 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 TLK1Q9UKI8 766 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
RFC4-213ENST00000489028 RAD54BQ9Y620 910 aa4.69□□□□□ -1.66
RFC4-213ENST00000489028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.69□□□□□ -1.66
RFC4-213ENST00000489028 A6NNZ2 444 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 TUSC2O75896 110 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 C1QL1O75973 258 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
RFC4-213ENST00000489028 FGL2Q14314 439 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 PPP2R5AQ15172 486 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 PTPRRQ15256 657 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 ADGRG3Q86Y34 549 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 DDX17Q92841 729 aaKnown RBP4.68□□□□□ -1.66
RFC4-213ENST00000489028 MTFMTQ96DP5 389 aaKnown RBP4.68□□□□□ -1.66
RFC4-213ENST00000489028 CRAMP1Q96RY5 1269 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 OSBPL9Q96SU4 736 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 HEPHQ9BQS7 1158 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 ACTRT3Q9BYD9 372 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 B3GNT5Q9BYG0 378 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 TTYH3Q9C0H2 523 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 SIK2Q9H0K1 926 aa4.68□□□□□ -1.66
RFC4-213ENST00000489028 SARS2Q9NP81 518 aaKnown RBP4.68□□□□□ -1.66
RFC4-213ENST00000489028 ARHGEF17Q96PE2 2063 aaPredicted RBP4.68□□□□□ -1.66
RFC4-213ENST00000489028 COL11A2P13942 1736 aaPredicted RBP4.67□□□□□ -1.66
RFC4-213ENST00000489028 TSPAN6O43657 245 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 GRPP07492 148 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 PDHA1P08559 390 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 ITGALP20701 1170 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 PCSK6P29122 969 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 CD6P30203 668 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 KCNJ5P48544 419 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 SP2Q02086 613 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 STRIP1Q5VSL9 837 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 KAZNQ674X7 775 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 NXNQ6DKJ4 435 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 FBXO42Q6P3S6 717 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 TMEM108Q6UXF1 575 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 NPNTQ6UXI9 565 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 DAAM2Q86T65 1068 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 TCEAL8Q8IYN2 117 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.67□□□□□ -1.66
RFC4-213ENST00000489028 MAGEB6Q8N7X4 407 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 RFKQ969G6 155 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 PGBD1Q96JS3 809 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 DUSP26Q9BV47 211 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 KIAA1586Q9HCI6 787 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 DKK3Q9UBP4 350 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 DDX20Q9UHI6 824 aaKnown RBP4.67□□□□□ -1.66
RFC4-213ENST00000489028 MED16Q9Y2X0 877 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 INSL6Q9Y581 213 aa4.67□□□□□ -1.66
RFC4-213ENST00000489028 LINC00473A8K010 186 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 TRIAP1O43715 76 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 CTNND1O60716 968 aaKnown RBP4.66□□□□□ -1.66
RFC4-213ENST00000489028 KITP10721 976 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 GRIA3P42263 894 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms