RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ATP8B2P98198 1209 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 ITKQ08881 620 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 MTM1Q13496 603 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 CLUL1Q15846 466 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 TIGD2Q4W5G0 525 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 BMP2KLQ5H9B9 411 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 RRP12Q5JTH9 1297 aaKnown RBP3.41□□□□□ -1.86
CALD1-221ENST00000489019 GJC2Q5T442 439 aaPredicted RBP3.41□□□□□ -1.86
CALD1-221ENST00000489019 AGAP9Q5VTM2 703 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 OTUD7BQ6GQQ9 843 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 CEP85Q6P2H3 762 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 KCNV1Q6PIU1 500 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 FAM180AQ6UWF9 173 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 MED25Q71SY5 747 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 G2E3Q7L622 706 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 FMNL3Q8IVF7 1028 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 AMOTL1Q8IY63 956 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 SYNE4Q8N205 404 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 IL17REQ8NFR9 667 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 RAPGEF4Q8WZA2 1011 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 MYEOVQ96EZ4 313 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 FAXDC2Q96IV6 333 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 CEP89Q96ST8 783 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 AGAP2Q99490 1192 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 MEIS3Q99687 375 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 ADAM2Q99965 735 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 TTPALQ9BTX7 342 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 DCTPP1Q9H773 170 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 FBXO34Q9NWN3 711 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 GABBR1Q9UBS5 961 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 INTUQ9ULD6 942 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 USP19O94966 1318 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 C1orf167Q5SNV9 1468 aa3.41□□□□□ -1.86
CALD1-221ENST00000489019 COL4A3Q01955 1670 aa3.4□□□□□ -1.86
CALD1-221ENST00000489019 KIF1AQ12756 1690 aa3.4□□□□□ -1.86
CALD1-221ENST00000489019 SETD1BQ9UPS6 1966 aaKnown RBP3.4□□□□□ -1.86
CALD1-221ENST00000489019 A0A087X1B8 175 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 GAGE12BA1L429 117 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 CCDC78A2IDD5 438 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 GRID2IPA4D2P6 1211 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 GAGE12HA6NDE8 117 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MARCH11A6NNE9 402 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 FAM171A2A8MVW0 826 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 RNASET2O00584 256 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 FOXN1O15353 648 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 SUV39H1O43463 412 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 NDUFS2O75306 463 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 NDUFA10O95299 355 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 DDX58O95786 925 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 ELANEP08246 267 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 UBTFL1P0CB47 393 aaPredicted RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 MYBL2P10244 700 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 IL2RBP14784 551 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 ATP5JP18859 108 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 SLC6A2P23975 617 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 WASP42768 502 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 EIF4A1P60842 406 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 COL10A1Q03692 680 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 FSTL1Q12841 308 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 OS9Q13438 667 aaPredicted RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 NWD1Q149M9 1564 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 PCBP2Q15366 365 aaKnown RBP eCLIP3.4□□□□□ -1.871e-7■□□□□ 10.9
CALD1-221ENST00000489019 CRB2Q5IJ48 1285 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 LY6G5CQ5SRR4 150 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 ODR4Q5SWX8 454 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 TTC22Q5TAA0 569 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 LAIR1Q6GTX8 287 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 ZNF529Q6P280 563 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 UBE3BQ7Z3V4 1068 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MRGPRGQ86SM5 289 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 ARHGEF25Q86VW2 580 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 PLXDC1Q8IUK5 500 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 RHOT2Q8IXI1 618 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 DCBLD1Q8N8Z6 715 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 CASKIN2Q8WXE0 1202 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 RAB24Q969Q5 203 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 RILPL2Q969X0 211 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MTMR8Q96EF0 704 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 PRRX2Q99811 253 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 LRRCC1Q9C099 1032 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 SLITRK6Q9H5Y7 841 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 TMEM140Q9NV12 185 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MKS1Q9NXB0 559 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MOCS1Q9NZB8 636 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 FAM30AQ9NZY2 134 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 ANKFY1Q9P2R3 1169 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 RUVBL1Q9Y265 456 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 MAP3K2Q9Y2U5 619 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 MARF1Q9Y4F3 1742 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 RIPOR2Q9Y4F9 1068 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 DMRT1Q9Y5R6 373 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 NPHP3Q7Z494 1330 aa3.4□□□□□ -1.87
CALD1-221ENST00000489019 WDR33Q9C0J8 1336 aaKnown RBP3.4□□□□□ -1.87
CALD1-221ENST00000489019 SLIT3O75094 1523 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 NFAT5O94916 1531 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 TMEM94Q12767 1356 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 RGS12O14924 1447 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 LOC102724159A0A0B4J2E5 919 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 UNC119BA6NIH7 251 aa3.39□□□□□ -1.87
CALD1-221ENST00000489019 TPD52L2O43399 206 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms