RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SHOC2Q9UQ13 582 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ARID2Q68CP9 1835 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 A0A1W2PPM1 405 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ZSCAN5DPP0CG00 497 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 PYGBP11216 843 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 JAK3P52333 1124 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 MRPS9P82933 396 aaKnown RBP20.55■□□□□ 0.88
HMG20B-213ENST00000488973 MCL1Q07820 350 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 CTC1Q2NKJ3 1217 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ABRAQ8N0Z2 381 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 FEZF2Q8TBJ5 459 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ZNF516Q92618 1163 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 SENP7Q9BQF6 1050 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 MAK16Q9BXY0 300 aaKnown RBP20.55■□□□□ 0.88
HMG20B-213ENST00000488973 IP6K2Q9UHH9 426 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ICAM1P05362 532 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 TROVE2P10155 538 aaKnown RBP eCLIP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 FGFR1P11362 822 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 ATP4AP20648 1035 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 CLDN10P78369 228 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 C1QBPQ07021 282 aaKnown RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 MTHFD1LQ6UB35 978 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 CLNKQ7Z7G1 428 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 TTC8Q8TAM2 541 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 EPAS1Q99814 870 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 PAPOLBQ9NRJ5 636 aaKnown RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 PARVAQ9NVD7 372 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 FBXO28Q9NVF7 368 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 ANKFY1Q9P2R3 1169 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 CCPG1Q9ULG6 757 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 ENTPD5O75356 428 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 KRT10P13645 584 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 ACO1P21399 889 aaKnown RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 GEMIN4P57678 1058 aaKnown RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 HP1BP3Q5SSJ5 553 aaPredicted RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 KAZNQ674X7 775 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 SAMD3Q8N6K7 520 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 RBBP8NLQ8NC74 664 aaPredicted RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 DNAJC9Q8WXX5 260 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 PRMT6Q96LA8 375 aaPredicted RBP20.54■□□□□ 0.88
HMG20B-213ENST00000488973 AGBL1Q96MI9 1066 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 TUBB6Q9BUF5 446 aa20.54■□□□□ 0.88
HMG20B-213ENST00000488973 KRT4P19013 534 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 SFNP31947 248 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 GHRHRQ02643 423 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 LBRQ14739 615 aaKnown RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 ARHGAP22Q7Z5H3 698 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 MTDHQ86UE4 582 aaKnown RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 BSNDQ8WZ55 320 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 FAM213AQ9BRX8 229 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 YIPF3Q9GZM5 350 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 NPHS2Q9NP85 383 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 WDR64B1ANS9 1081 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 ETS1P14921 441 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 CHRNA5P30532 468 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 VCPP55072 806 aaKnown RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 PDIA2Q13087 525 aaKnown RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 OASLQ15646 514 aaKnown RBP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 MAPK6Q16659 721 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 SGSM1Q2NKQ1 1148 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 ZACNQ401N2 412 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 MFSD7Q6UXD7 560 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 C4orf50Q6ZRC1 276 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 SUPT20HQ8NEM7 779 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 PHACTR1Q9C0D0 580 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 STOML1Q9UBI4 398 aa20.53■□□□□ 0.88
HMG20B-213ENST00000488973 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.53■□□□□ 0.88
HMG20B-213ENST00000488973 DPPA5A6NC42 116 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 PI4K2BG5E9Z4 385 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 H0Y3Z8 333 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 HNRNPDLO14979 420 aaKnown RBP20.52■□□□□ 0.88
HMG20B-213ENST00000488973 CCDC22O60826 627 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 ITGAVP06756 1048 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 CFHP08603 1231 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 ATF7P17544 494 aaPredicted RBP20.52■□□□□ 0.88
HMG20B-213ENST00000488973 PTPN7P35236 360 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 PTGER2P43116 358 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 ATP13A4Q4VNC1 1196 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 LRRC38Q5VT99 294 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 CAPN12Q6ZSI9 719 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
HMG20B-213ENST00000488973 NLRX1Q86UT6 975 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 MCF2L2Q86YR7 1114 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 PASD1Q8IV76 773 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 CLEC4DQ8WXI8 215 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 NKD2Q969F2 451 aaPredicted RBP20.52■□□□□ 0.88
HMG20B-213ENST00000488973 PCDH9Q9HC56 1237 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 KLHL11Q9NVR0 708 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 RABGEF1Q9UJ41 708 aa20.52■□□□□ 0.88
HMG20B-213ENST00000488973 NFIBO00712 420 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 TM9SF1O15321 606 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 HLA-DRAP01903 254 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 KRT1P04264 644 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 GNA15P30679 374 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 PHBP35232 272 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.87
HMG20B-213ENST00000488973 PLEKHG4Q58EX7 1191 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 ANO5Q75V66 913 aa20.52■□□□□ 0.87
HMG20B-213ENST00000488973 PCGF5Q86SE9 256 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms