RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ACOT1Q86TX2 421 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ZNF280BQ86YH2 543 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ADGRF2Q8IZF7 708 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 TOP6BLQ8N6T0 577 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 C12orf29Q8N999 325 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 C1orf131Q8NDD1 294 aaKnown RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 SLC35G2Q8TBE7 412 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 HEXIM2Q96MH2 286 aaKnown RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ALS2CR12Q96Q35 445 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 DPEP3Q9H4B8 488 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ELAC1Q9H777 363 aaKnown RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 PRDM5Q9NQX1 630 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 PCDHB7Q9Y5E2 793 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 ENC1O14682 589 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 B3GAT3O94766 335 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 DDHD2O94830 711 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 NOP2P46087 812 aaKnown RBP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 GATMP50440 423 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 C2CD6Q53TS8 623 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 DENND1BQ6P3S1 775 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 DPH6Q7L8W6 267 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 CRIPAKQ8N1N5 446 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 SENP8Q96LD8 212 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 COG5Q9UP83 839 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 PCDHGC5Q9Y5F6 944 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 GRID2IPA4D2P6 1211 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 A8MXQ7 604 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 F8W810 466 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 O00370 1275 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 MED7O43513 233 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 PALMO75781 387 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 LSM8O95777 96 aaKnown RBP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 VDRP11473 427 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 LMO2P25791 158 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 GPC5P78333 572 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 DSC1Q08554 894 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 SGO2Q562F6 1265 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 WSCD1Q658N2 575 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 UNC93AQ86WB7 457 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 OSTM1Q86WC4 334 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 MCOLN2Q8IZK6 566 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 NAPGQ99747 312 aaPredicted RBP11.6□□□□□ -0.55
COL21A1-211ENST00000488912 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 GTF3C4Q9UKN8 822 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 STXBP5LQ9Y2K9 1186 aa11.6□□□□□ -0.55
COL21A1-211ENST00000488912 I3L4J1 428 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 URI1O94763 535 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 KIF4AO95239 1232 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 ATP1A1P05023 1023 aaKnown RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 ITGB1P05556 798 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CDH5P33151 784 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 GNL1P36915 607 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TIGD5Q53EQ6 642 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CD300LGQ6UXG3 332 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 MMS22LQ6ZRQ5 1243 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 ABI1Q8IZP0 508 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 WDTC1Q8N5D0 677 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 UROC1Q96N76 676 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LPIN3Q9BQK8 851 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 SNX25Q9H3E2 840 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CALCOCO1Q9P1Z2 691 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LRFN2Q9ULH4 789 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 M0QYV0 167 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 MICAL2O94851 1124 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TIMP1P01033 207 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CYP1A2P05177 515 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 WARSP23381 471 aaKnown RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 RRM1P23921 792 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 BRCC3P46736 316 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 PTP4A2Q12974 167 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TERF2Q15554 542 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LLGL2Q6P1M3 1020 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 CNKSR3Q6P9H4 555 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 DSTYKQ6XUX3 929 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
COL21A1-211ENST00000488912 RHOT2Q8IXI1 618 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 LRRC57Q8N9N7 239 aa11.59□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM35BQ8NCS4 154 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms