RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 LRRC4CQ9HCJ2 640 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 HSPBP1Q9NZL4 362 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 ALPK3Q96L96 1907 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 DRD4P21917 467 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 DMP1Q13316 513 aaPredicted RBP19.44■□□□□ 0.7
COL16A1-215ENST00000488897 SLMAPQ14BN4 828 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 TRAF7Q6Q0C0 670 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 FAM71AQ8IYT1 594 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 CCDC114Q96M63 670 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 CBWD1Q9BRT8 395 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM109Q9BVC6 243 aa19.44■□□□□ 0.7
COL16A1-215ENST00000488897 RGS16O15492 202 aaPredicted RBP19.43■□□□□ 0.7
COL16A1-215ENST00000488897 MMP13P45452 471 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 RPL21P46778 160 aaKnown RBP19.43■□□□□ 0.7
COL16A1-215ENST00000488897 MXI1P50539 228 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 SLC29A2Q14542 456 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 CYP1B1Q16678 543 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 C1orf220Q5T0J3 134 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM161BQ8NDZ6 487 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 DEPTORQ8TB45 409 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 PCDHB18PQ96TA0 734 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 ST6GALNAC4Q9H4F1 302 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 FAM170AA1A519 330 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 AGTP01019 485 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 MARCKSL1P49006 195 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 MRPS6P82932 125 aaKnown RBP19.43■□□□□ 0.7
COL16A1-215ENST00000488897 PTK7Q13308 1070 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 MDM1Q8TC05 714 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 EPS8L1Q8TE68 723 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 KIFAP3Q92845 792 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 CD101Q93033 1021 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 IFT74Q96LB3 600 aa19.43■□□□□ 0.7
COL16A1-215ENST00000488897 STMN4Q9H169 189 aaPredicted RBP19.43■□□□□ 0.7
COL16A1-215ENST00000488897 CHRNB2P17787 502 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 CD52P31358 61 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 MFAP3P55082 362 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 GTF2BQ00403 316 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 SNX17Q15036 470 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 LACTB2Q53H82 288 aaPredicted RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TAX1BP1Q86VP1 789 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TIPINQ9BVW5 301 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM117Q9H0C3 514 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 NOCTQ9UK39 431 aaKnown RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TLDC2A0PJX2 215 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 CLTBP09497 229 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 ACRP10323 421 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 PYGMP11217 842 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 HARSP12081 509 aaKnown RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 CHN1P15882 459 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 COILP38432 576 aaPredicted RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TTC27Q6P3X3 843 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 NOP9Q86U38 636 aaKnown RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 SLC13A5Q86YT5 568 aaPredicted RBP19.42■□□□□ 0.7
COL16A1-215ENST00000488897 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 TCP11Q8WWU5 503 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 KLC4Q9NSK0 619 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 PCDHA3Q9Y5H8 950 aa19.42■□□□□ 0.7
COL16A1-215ENST00000488897 SPOPO43791 374 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 NBNO60934 754 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 RASSF9O75901 435 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 CYP1A2P05177 515 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 RARGP13631 454 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
COL16A1-215ENST00000488897 ANKRD20A8PQ5CZ79 823 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
COL16A1-215ENST00000488897 ZDHHC14Q8IZN3 488 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 ZNF564Q8TBZ8 553 aaPredicted RBP19.41■□□□□ 0.7
COL16A1-215ENST00000488897 TARS2Q9BW92 718 aaKnown RBP19.41■□□□□ 0.7
COL16A1-215ENST00000488897 SEMA4AQ9H3S1 761 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 UVRAGQ9P2Y5 699 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 SIP14410 1827 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 ANKRD63C9JTQ0 380 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 MBTD1Q05BQ5 628 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 MGAT3Q09327 533 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 KAT5Q92993 513 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 SELENOSQ9BQE4 189 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 NUP85Q9BW27 656 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 KDM4CQ9H3R0 1056 aa19.41■□□□□ 0.7
COL16A1-215ENST00000488897 K7ERI5 159 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 MMEP08473 750 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 CSF2RAP15509 400 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 MXD4Q14582 209 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-215ENST00000488897 TMEM130Q8N3G9 435 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 PPM1KQ8N3J5 372 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 PLEKHO2Q8TD55 490 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 SHC3Q92529 594 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 ART4Q93070 314 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 FAM84AQ96KN4 292 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 GTF3C4Q9UKN8 822 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 CHD7Q9P2D1 2997 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 CYP26A1O43174 497 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 NAMPTP43490 491 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 RWDD2BP57060 319 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 LPIN1Q14693 890 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 LRRC8DQ7L1W4 858 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 ZBTB33Q86T24 672 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 FAM228AQ86W67 206 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms