RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ALDH1A3P47895 512 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 TUFMP49411 452 aaKnown RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 STX17P56962 302 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 MCCD1P59942 119 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 DUSP4Q13115 394 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 NFE2Q16621 373 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 CCDC40Q4G0X9 1142 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 DCAF17Q5H9S7 520 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 TCERG1LQ5VWI1 586 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 KRT39Q6A163 491 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 TTI2Q6NXR4 508 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 LIMS2Q7Z4I7 341 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 GRASPQ7Z6J2 395 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 FRMD5Q7Z6J6 570 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 TDRD5Q8NAT2 981 aaKnown RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 SPPL2BQ8TCT7 592 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 ZNF512Q96ME7 567 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 DUSP9Q99956 384 aaKnown RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 XYLT2Q9H1B5 865 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 DACH1Q9UI36 760 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 CLUHO75153 1309 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 TACC1O75410 805 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 VNN1O95497 513 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 HLA-DRAP01903 254 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-207ENST00000488591 PPP3CAQ08209 521 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 TWF1Q12792 350 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 INTS6LQ5JSJ4 861 aaKnown RBP16.12■□□□□ 0.17
CXCL12-207ENST00000488591 ATAD1Q8NBU5 361 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 FEZF2Q8TBJ5 459 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 CD320Q9NPF0 282 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.12■□□□□ 0.17
CXCL12-207ENST00000488591 RWDD2AQ9UIY3 292 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 CDH9Q9ULB4 789 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 SLC27A5Q9Y2P5 690 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 PCDHB5Q9Y5E4 795 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 C2orf16Q68DN1 1984 aa16.12■□□□□ 0.17
CXCL12-207ENST00000488591 GNA14O95837 355 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 FSHRP23945 695 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 ACAT1P24752 427 aaKnown RBP16.11■□□□□ 0.17
CXCL12-207ENST00000488591 GBP2P32456 591 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-207ENST00000488591 MXI1P50539 228 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 EPHB3P54753 998 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 MAPRE1Q15691 268 aaKnown RBP16.11■□□□□ 0.17
CXCL12-207ENST00000488591 MGAT5BQ3V5L5 792 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 PABPC1LQ4VXU2 614 aaKnown RBP16.11■□□□□ 0.17
CXCL12-207ENST00000488591 LRRTM3Q86VH5 581 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 OSTM1Q86WC4 334 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 KBTBD7Q8WVZ9 684 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-207ENST00000488591 YIPF1Q9Y548 306 aa16.11■□□□□ 0.17
CXCL12-207ENST00000488591 TTC28Q96AY4 2481 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 C2CD4DB7Z1M9 353 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 VNN2O95498 520 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 ASS1P00966 412 aaKnown RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 PDGFRBP09619 1106 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 NLRP12P59046 1061 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 CYP4A22Q5TCH4 519 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 C4orf50Q6ZRC1 276 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 RNF135Q8IUD6 432 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 ZDHHC14Q8IZN3 488 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 LEMD2Q8NC56 503 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 FBXL13Q8NEE6 735 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 TAS1R2Q8TE23 839 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 SYT15Q9BQS2 421 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 CORO1BQ9BR76 489 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 MRPL45Q9BRJ2 306 aaKnown RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 HCFC1R1Q9NWW0 138 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 DNMT3BQ9UBC3 853 aaKnown RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 GTF3C4Q9UKN8 822 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 ASB3Q9Y575 518 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 ZFP37Q9Y6Q3 630 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-207ENST00000488591 NCOR1O75376 2440 aa16.1■□□□□ 0.17
CXCL12-207ENST00000488591 BDP1A6H8Y1 2624 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 A8MXQ7 604 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 ZNF197O14709 1029 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 RHOP08100 348 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 CCDC192P0DO97 292 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 ALADP13716 330 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 TRIM21P19474 475 aaKnown RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 LMO2P25791 158 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 NTHL1P78549 312 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 CETN1Q12798 172 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 TAF12Q16514 161 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 PDZD4Q76G19 769 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 GET4Q7L5D6 327 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 ITIH5Q86UX2 942 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms