RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
C9orf3-219ENST00000488186 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 APOBEC3GQ9HC16 384 aaKnown RBP16.82■□□□□ 0.28
C9orf3-219ENST00000488186 MAN1C1Q9NR34 630 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 DZANK1Q9NVP4 752 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 GCNT4Q9P109 453 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 CDH9Q9ULB4 789 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
C9orf3-219ENST00000488186 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 GABRDO14764 452 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 CD58P19256 250 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 KCNA5P22460 613 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 LTBRP36941 435 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 YWHAEP62258 255 aaKnown RBP16.81■□□□□ 0.28
C9orf3-219ENST00000488186 SMARCB1Q12824 385 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 GPR17Q13304 367 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 NCAPHQ15003 741 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 KRT31Q15323 416 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 RNF19BQ6ZMZ0 732 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 CCDC149Q6ZUS6 474 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 TTC39CQ8N584 583 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 FAM200AQ8TCP9 573 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 HDAC7Q8WUI4 952 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 KBTBD7Q8WVZ9 684 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 PGLYRP2Q96PD5 576 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 ASB2Q96Q27 587 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 TMEM209Q96SK2 561 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 SYT15Q9BQS2 421 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 INTS2Q9H0H0 1204 aaKnown RBP16.81■□□□□ 0.28
C9orf3-219ENST00000488186 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 CYP4F11Q9HBI6 524 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 AFF4Q9UHB7 1163 aaKnown RBP16.81■□□□□ 0.28
C9orf3-219ENST00000488186 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
C9orf3-219ENST00000488186 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-219ENST00000488186 WDR27A2RRH5 827 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 LRRN2O75325 713 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 ATF2P15336 505 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 HOXB8P17481 243 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 TBXAS1P24557 533 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 LMO2P25791 158 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 ASPAP45381 313 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 ADCY1Q08828 1119 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 MAPRE1Q15691 268 aaKnown RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 FILIP1LQ4L180 1135 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 PPM1LQ5SGD2 360 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 ANKRD54Q6NXT1 300 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 LILRA6Q6PI73 481 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 LUZP1Q86V48 1076 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 PPM1KQ8N3J5 372 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 OR10T2Q8NGX3 314 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 RTP3Q9BQQ7 232 aa16.8■□□□□ 0.28
C9orf3-219ENST00000488186 LIMA1Q9UHB6 759 aaKnown RBP16.8■□□□□ 0.28
C9orf3-219ENST00000488186 TTC28Q96AY4 2481 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 GTPBP10A4D1E9 387 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 H3BQ06 376 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 ABLIM3O94929 683 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 GLP2RO95838 553 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 NDST1P52848 882 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 CUL2Q13617 745 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 IQCB1Q15051 598 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 CLUL1Q15846 466 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 INTS6LQ5JSJ4 861 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 TJAP1Q5JTD0 557 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 CES5AQ6NT32 575 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 UNC93AQ86WB7 457 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 SPATA2LQ8IUW3 424 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 VN1R2Q8NFZ6 395 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 C2orf15Q8WU43 125 aaKnown RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 FAM81BQ96LP2 452 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-219ENST00000488186 APOL5Q9BWW9 433 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 PRDM6Q9NQX0 595 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 GTF3C4Q9UKN8 822 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 FAM50BQ9Y247 325 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 PCDHB5Q9Y5E4 795 aa16.79■□□□□ 0.28
C9orf3-219ENST00000488186 PAPLNO95428 1278 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 SERPINC1P01008 464 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 LRG1P02750 347 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 C8AP07357 584 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 ZNF18P17022 549 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
C9orf3-219ENST00000488186 SLC9A1P19634 815 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 CDR1P51861 262 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms