RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 KRT13P13646 458 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 PSMC2P35998 433 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 ALDH1A3P47895 512 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 LHX1P48742 406 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 VAMP7P51809 220 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 CCDC142Q17RM4 750 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 WDR72Q3MJ13 1102 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 MGAT5BQ3V5L5 792 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 COBLL1Q53SF7 1204 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 INTS6LQ5JSJ4 861 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 INTS8Q75QN2 995 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 HS6ST3Q8IZP7 471 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 SPATA18Q8TC71 538 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 KBTBD7Q8WVZ9 684 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 RSAD2Q8WXG1 361 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 SYAP1Q96A49 352 aaPredicted RBP25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 ELMO3Q96BJ8 720 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 ACBD6Q9BR61 282 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 MMRN2Q9H8L6 949 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 KCNK12Q9HB15 430 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 TMLHEQ9NVH6 421 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 NXF1Q9UBU9 619 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 CDH7Q9ULB5 785 aa25.38■■□□□ 1.65
RHBDD3-205ENST00000488106 VNN1O95497 513 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 C4BPAP04003 597 aaKnown RBP25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 CEBPBP17676 345 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 EPHB3P54753 998 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 STIM1Q13586 685 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 NCOA4Q13772 614 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 ZNF699Q32M78 642 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 C1orf220Q5T0J3 134 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 PDZD4Q76G19 769 aaPredicted RBP25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 DPH6Q7L8W6 267 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 NPAS3Q8IXF0 933 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 ADSSL1Q8N142 457 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 GTPBP4Q9BZE4 634 aaKnown RBP25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 XYLT2Q9H1B5 865 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 DNAJC25Q9H1X3 360 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 ASAH2Q9NR71 780 aa25.37■■□□□ 1.65
RHBDD3-205ENST00000488106 GABRDO14764 452 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 GPR37L1O60883 481 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 MYL4P12829 197 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 PCSK1P29120 753 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 ATICP31939 592 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 PIK3CAP42336 1068 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 PMS1P54277 932 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 PSMC1P62191 440 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 CAMK4Q16566 473 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 SCARA5Q6ZMJ2 495 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 LIMS2Q7Z4I7 341 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 FAM200AQ8TCP9 573 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 SPPL2BQ8TCT7 592 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 C2orf15Q8WU43 125 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 TCEAL4Q96EI5 215 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 LPIN3Q9BQK8 851 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 MRPL45Q9BRJ2 306 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 LRFN3Q9BTN0 628 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 AVENQ9NQS1 362 aaPredicted RBP25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 IGSF9Q9P2J2 1179 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 PCDHB5Q9Y5E4 795 aa25.36■■□□□ 1.65
RHBDD3-205ENST00000488106 MYO16Q9Y6X6 1858 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 PSMA7O14818 248 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 CETN3O15182 167 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 STAU1O95793 577 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 EPB41P11171 864 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 CD44P16070 742 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 WARSP23381 471 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 CCR2P41597 374 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 SMARCB1Q12824 385 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 ZACNQ401N2 412 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 PRSS36Q5K4E3 855 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 CYP4A22Q5TCH4 519 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 ANKRD40Q6AI12 368 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 KLHL10Q6JEL2 608 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 TRIM67Q6ZTA4 783 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 SYT15Q9BQS2 421 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 PI4K2AQ9BTU6 479 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 HSFX1Q9UBD0 423 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 ZFP37Q9Y6Q3 630 aaPredicted RBP25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 TICRRQ7Z2Z1 1910 aa25.35■■□□□ 1.65
RHBDD3-205ENST00000488106 HELZP42694 1942 aaKnown RBP25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 NRG2O14511 850 aaPredicted RBP25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 ATP2C2O75185 946 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 ATF6P18850 670 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 LMO2P25791 158 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 GCLMP48507 274 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 TUFMP49411 452 aaKnown RBP25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 SIGLEC14Q08ET2 396 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 TDGQ13569 410 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 HTR4Q13639 388 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 NFE2Q16621 373 aaPredicted RBP25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 ZNF667Q5HYK9 610 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 SV2AQ7L0J3 742 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 MCRS1Q96EZ8 462 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 PKMYT1Q99640 499 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 SNX25Q9H3E2 840 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 SMYD3Q9H7B4 428 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.34■■□□□ 1.652e-6■■■■■ 96.1
RHBDD3-205ENST00000488106 GTF3C4Q9UKN8 822 aa25.34■■□□□ 1.65
RHBDD3-205ENST00000488106 NUMBLQ9Y6R0 609 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms