RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ATRIPQ8WXE1 791 aa5.21□□□□□ -1.58
CCDC66-221ENST00000487739 DDX17Q92841 729 aaKnown RBP5.21□□□□□ -1.58
CCDC66-221ENST00000487739 FAM136AQ96C01 138 aa5.21□□□□□ -1.58
CCDC66-221ENST00000487739 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
CCDC66-221ENST00000487739 TINAGL1Q9GZM7 467 aaPredicted RBP5.21□□□□□ -1.58
CCDC66-221ENST00000487739 FEZ2Q9UHY8 353 aaPredicted RBP5.21□□□□□ -1.58
CCDC66-221ENST00000487739 ZDHHC8Q9ULC8 765 aa5.21□□□□□ -1.58
CCDC66-221ENST00000487739 RAD54BQ9Y620 910 aa5.21□□□□□ -1.58
CCDC66-221ENST00000487739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 PRSS29PA6NIE9 313 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 VPS4BO75351 444 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 KIF20AO95235 890 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 HNRNPCP07910 306 aaKnown RBP eCLIP5.2□□□□□ -1.58
CCDC66-221ENST00000487739 CHRM3P20309 590 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 NOGQ13253 232 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 GRM1Q13255 1194 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 TBCCQ15814 346 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 FAM109AQ8N4B1 249 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 RGMAQ96B86 450 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF778Q96MU6 729 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 SERTAD4Q9NUC0 356 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 MRPS18AQ9NVS2 196 aaKnown RBP5.2□□□□□ -1.58
CCDC66-221ENST00000487739 AGAP1Q9UPQ3 857 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 PCDHA3Q9Y5H8 950 aa5.2□□□□□ -1.58
CCDC66-221ENST00000487739 WDR91A4D1P6 747 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 ZRANB2O95218 330 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCDC66-221ENST00000487739 NDUFB7P17568 137 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 PHKA1P46020 1223 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 GCLCP48506 637 aaPredicted RBP5.19□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF618Q5T7W0 954 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 HEATR3Q7Z4Q2 680 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 PPP1R32Q7Z5V6 425 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 KLHDC4Q8TBB5 520 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 TNPO1Q92973 898 aaKnown RBP5.19□□□□□ -1.58
CCDC66-221ENST00000487739 ARHGEF3Q9NR81 526 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 ABCF2Q9UG63 623 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 SPEF1Q9Y4P9 236 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 KAT6AQ92794 2004 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 TNKSO95271 1327 aa5.19□□□□□ -1.58
CCDC66-221ENST00000487739 TARM1B6A8C7 271 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 M0QYG6 137 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 PCSK6P29122 969 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 RECQLP46063 649 aaPredicted RBP5.18□□□□□ -1.58
CCDC66-221ENST00000487739 HK3P52790 923 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 AMPD3Q01432 767 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 TFF2Q03403 129 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 TMEM119Q4V9L6 283 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 VPS53Q5VIR6 699 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 USP37Q86T82 979 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 CPA6Q8N4T0 437 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 VGLL2Q8N8G2 317 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 NELL2Q99435 816 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 SMAD5Q99717 465 aaKnown RBP5.18□□□□□ -1.58
CCDC66-221ENST00000487739 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.18□□□□□ -1.58
CCDC66-221ENST00000487739 SERGEFQ9UGK8 458 aa5.18□□□□□ -1.58
CCDC66-221ENST00000487739 SBNO2Q9Y2G9 1366 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 FTLP02792 175 aaPredicted RBP5.17□□□□□ -1.58
CCDC66-221ENST00000487739 PDCP20941 246 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 TOB1P50616 345 aaPredicted RBP5.17□□□□□ -1.58
CCDC66-221ENST00000487739 EIF2B5Q13144 721 aaKnown RBP5.17□□□□□ -1.58
CCDC66-221ENST00000487739 ANKRD16Q6P6B7 361 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF782Q6ZMW2 699 aaPredicted RBP5.17□□□□□ -1.58
CCDC66-221ENST00000487739 SLC29A4Q7RTT9 530 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF804AQ7Z570 1209 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 TBC1D5Q92609 795 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 FAM167AQ96KS9 214 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 SEMA4CQ9C0C4 833 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 MRPL46Q9H2W6 279 aaKnown RBP5.17□□□□□ -1.58
CCDC66-221ENST00000487739 LMBRD1Q9NUN5 540 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF804BA4D1E1 1349 aa5.17□□□□□ -1.58
CCDC66-221ENST00000487739 JTBO76095 146 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 SNUPNO95149 360 aaKnown RBP5.16□□□□□ -1.58
CCDC66-221ENST00000487739 ALDH9A1P49189 494 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 MTX3Q5HYI7 312 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 FAM160B1Q5W0V3 765 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 SFRP4Q6FHJ7 346 aaPredicted RBP5.16□□□□□ -1.58
CCDC66-221ENST00000487739 ZNF425Q6IV72 752 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 TMEM108Q6UXF1 575 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 USP45Q70EL2 814 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 SERHLQ9NQF3 203 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 WASHC2CQ9Y4E1 1318 aa5.16□□□□□ -1.58
CCDC66-221ENST00000487739 SETD1BQ9UPS6 1966 aaKnown RBP5.15□□□□□ -1.58
CCDC66-221ENST00000487739 PPM1DO15297 605 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 TLR5O60602 858 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 FAM163BP0C2L3 166 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 PRR35P0CG20 571 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 PIM1P11309 404 aaPredicted RBP5.15□□□□□ -1.59
CCDC66-221ENST00000487739 TYRP14679 529 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 JUPP14923 745 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 ITGB6P18564 788 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 EVA1CP58658 441 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 AARS2Q5JTZ9 985 aaKnown RBP5.15□□□□□ -1.59
CCDC66-221ENST00000487739 ICE2Q659A1 982 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 DTX2Q86UW9 622 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 PRR18Q8N4B5 295 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 FAM46DQ8NEK8 389 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 PUS7Q96PZ0 661 aaKnown RBP5.15□□□□□ -1.59
CCDC66-221ENST00000487739 ASPSCR1Q9BZE9 553 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms