RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.65
RNF220-215ENST00000487332 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
RNF220-215ENST00000487332 FBXL6Q8N531 539 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 PLEKHO2Q8TD55 490 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 SYAP1Q96A49 352 aaPredicted RBP11.02□□□□□ -0.65
RNF220-215ENST00000487332 PGLYRP2Q96PD5 576 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 PRRX2Q99811 253 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 LRRC3Q9BY71 257 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 TRPV4Q9HBA0 871 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 CHMP5Q9NZZ3 219 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 WNT16Q9UBV4 365 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 FRMD4BQ9Y2L6 1034 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 NUMBLQ9Y6R0 609 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 TTC28Q96AY4 2481 aa11.02□□□□□ -0.65
RNF220-215ENST00000487332 SOBPA7XYQ1 873 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 CEBPBP17676 345 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 NR2F2P24468 414 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 WEE1P30291 646 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 MAGEA11P43364 429 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 PNOCQ13519 176 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 VEPH1Q14D04 833 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
RNF220-215ENST00000487332 ZACNQ401N2 412 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 FAM171BQ6P995 826 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 OSTM1Q86WC4 334 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
RNF220-215ENST00000487332 SLC44A3Q8N4M1 653 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 ZNF516Q92618 1163 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 TAF4BQ92750 862 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 ELSPBP1Q96BH3 223 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 CCDC127Q96BQ5 260 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 FAXDC2Q96IV6 333 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 CORO1BQ9BR76 489 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 XYLT2Q9H1B5 865 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 CDH9Q9ULB4 789 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 PCDHB5Q9Y5E4 795 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 BDP1A6H8Y1 2624 aa11.01□□□□□ -0.65
RNF220-215ENST00000487332 KMT2EQ8IZD2 1858 aa11□□□□□ -0.65
RNF220-215ENST00000487332 KINO60870 393 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 MOSPD3O75425 235 aa11□□□□□ -0.65
RNF220-215ENST00000487332 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 ATF6P18850 670 aa11□□□□□ -0.65
RNF220-215ENST00000487332 FCARP24071 287 aa11□□□□□ -0.65
RNF220-215ENST00000487332 CDC25CP30307 473 aa11□□□□□ -0.65
RNF220-215ENST00000487332 PSMC2P35998 433 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 CCR2P41597 374 aa11□□□□□ -0.65
RNF220-215ENST00000487332 PFKPQ01813 784 aa11□□□□□ -0.65
RNF220-215ENST00000487332 LRRC63Q05C16 580 aa11□□□□□ -0.65
RNF220-215ENST00000487332 TRPC3Q13507 836 aa11□□□□□ -0.65
RNF220-215ENST00000487332 MGAT5BQ3V5L5 792 aa11□□□□□ -0.65
RNF220-215ENST00000487332 TDRD10Q5VZ19 366 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 PARM1Q6UWI2 310 aa11□□□□□ -0.65
RNF220-215ENST00000487332 C4orf50Q6ZRC1 276 aa11□□□□□ -0.65
RNF220-215ENST00000487332 LRRTM3Q86VH5 581 aa11□□□□□ -0.65
RNF220-215ENST00000487332 TTC9BQ8N6N2 239 aa11□□□□□ -0.65
RNF220-215ENST00000487332 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
RNF220-215ENST00000487332 FGF14Q92915 247 aa11□□□□□ -0.65
RNF220-215ENST00000487332 SMARCE1Q969G3 411 aa11□□□□□ -0.65
RNF220-215ENST00000487332 E2F7Q96AV8 911 aa11□□□□□ -0.65
RNF220-215ENST00000487332 TRMT2BQ96GJ1 504 aaKnown RBP11□□□□□ -0.65
RNF220-215ENST00000487332 FAM84AQ96KN4 292 aa11□□□□□ -0.65
RNF220-215ENST00000487332 ASB16Q96NS5 453 aa11□□□□□ -0.65
RNF220-215ENST00000487332 OBP2AQ9NY56 170 aa11□□□□□ -0.65
RNF220-215ENST00000487332 CUL9Q8IWT3 2517 aa11□□□□□ -0.65
RNF220-215ENST00000487332 TCHHQ07283 1943 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 SCN1AP35498 2009 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 SLC16A3O15427 465 aaKnown RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 AKAP3O75969 853 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CST3P01034 146 aaPredicted RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 CSH1P0DML2 217 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CSH2P0DML3 217 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 P4HA1P13674 534 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 DDX6P26196 483 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNF220-215ENST00000487332 GTF2H1P32780 548 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CASP4P49662 377 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CLCN5P51795 746 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 VAMP7P51809 220 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 UBE2HP62256 183 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 RPL10AP62906 217 aaKnown RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 TNNC1P63316 161 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 NCOA4Q13772 614 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 ZNF699Q32M78 642 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 CWF19L1Q69YN2 538 aaKnown RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 SCARA3Q6AZY7 606 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 DNAJB7Q7Z6W7 309 aaPredicted RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 FAM186BQ8IYM0 893 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 SHKBP1Q8TBC3 707 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 DNASE1L2Q92874 299 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 MYRFLQ96LU7 910 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
RNF220-215ENST00000487332 SYT15Q9BQS2 421 aa10.99□□□□□ -0.65
RNF220-215ENST00000487332 SMOC2Q9H3U7 446 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms