RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 EPHB3P54753 998 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 EPHA5P54756 1037 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 SNRPFP62306 86 aaKnown RBP17.03■□□□□ 0.32
GABPA-203ENST00000487266 NUCB2P80303 420 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 PSMD2Q13200 908 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 PLD1Q13393 1074 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 SMYD4Q8IYR2 804 aaPredicted RBP17.03■□□□□ 0.32
GABPA-203ENST00000487266 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 KBTBD7Q8WVZ9 684 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 GDAP2Q9NXN4 497 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 GDE1Q9NZC3 331 aa17.03■□□□□ 0.32
GABPA-203ENST00000487266 PTPRDP23468 1912 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 NUP210Q8TEM1 1887 aaPredicted RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 PI15O43692 258 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 RHOBTB3O94955 611 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 CST3P01034 146 aaPredicted RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 NR3C1P04150 777 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 PSMC1P62191 440 aaKnown RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 MYO1EQ12965 1108 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 PNOCQ13519 176 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 GRM2Q14416 872 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 INTS6LQ5JSJ4 861 aaKnown RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 GIPC2Q8TF65 315 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 PSMG2Q969U7 264 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 PKMYT1Q99640 499 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 PI4K2AQ9BTU6 479 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 ARHGEF3Q9NR81 526 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 DMAC2Q9NW81 257 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
GABPA-203ENST00000487266 WNT16Q9UBV4 365 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 NME7Q9Y5B8 376 aa17.02■□□□□ 0.32
GABPA-203ENST00000487266 DENND4CQ5VZ89 1909 aa17.02■□□□□ 0.31
GABPA-203ENST00000487266 TICRRQ7Z2Z1 1910 aa17.02■□□□□ 0.31
GABPA-203ENST00000487266 COL4A2P08572 1712 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 LRRIQ3A6PVS8 624 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 ZNF197O14709 1029 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 ATP2C2O75185 946 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 LMO2P25791 158 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 DLG4P78352 724 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 TSPY1Q01534 308 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 TCF15Q12870 199 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 ASTLQ6HA08 431 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 GAREM2Q75VX8 874 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 TMEM86AQ8N2M4 240 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 ASB16Q96NS5 453 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 SLC2A4RGQ9NR83 387 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 GTF3C4Q9UKN8 822 aa17.01■□□□□ 0.31
GABPA-203ENST00000487266 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
GABPA-203ENST00000487266 MYBPHLA2RUH7 354 aa17■□□□□ 0.31
GABPA-203ENST00000487266 PDXKO00764 312 aa17■□□□□ 0.31
GABPA-203ENST00000487266 GABRDO14764 452 aa17■□□□□ 0.31
GABPA-203ENST00000487266 ECI2O75521 394 aa17■□□□□ 0.31
GABPA-203ENST00000487266 GABRR2P28476 465 aa17■□□□□ 0.31
GABPA-203ENST00000487266 VIPR2P41587 438 aa17■□□□□ 0.31
GABPA-203ENST00000487266 MYL6P60660 151 aa17■□□□□ 0.31
GABPA-203ENST00000487266 CYP4F8P98187 520 aa17■□□□□ 0.31
GABPA-203ENST00000487266 MYL7Q01449 175 aa17■□□□□ 0.31
GABPA-203ENST00000487266 SNW1Q13573 536 aaKnown RBP17■□□□□ 0.31
GABPA-203ENST00000487266 CEP135Q66GS9 1140 aa17■□□□□ 0.31
GABPA-203ENST00000487266 LIMS2Q7Z4I7 341 aa17■□□□□ 0.31
GABPA-203ENST00000487266 LEMD2Q8NC56 503 aa17■□□□□ 0.31
GABPA-203ENST00000487266 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
GABPA-203ENST00000487266 SPPL2BQ8TCT7 592 aa17■□□□□ 0.31
GABPA-203ENST00000487266 PARD3BQ8TEW8 1205 aa17■□□□□ 0.31
GABPA-203ENST00000487266 RSPRY1Q96DX4 576 aa17■□□□□ 0.31
GABPA-203ENST00000487266 MMS19Q96T76 1030 aa17■□□□□ 0.31
GABPA-203ENST00000487266 ACBD6Q9BR61 282 aa17■□□□□ 0.31
GABPA-203ENST00000487266 MRPL45Q9BRJ2 306 aaKnown RBP17■□□□□ 0.31
GABPA-203ENST00000487266 MKNK1Q9BUB5 465 aa17■□□□□ 0.31
GABPA-203ENST00000487266 SLITRK6Q9H5Y7 841 aa17■□□□□ 0.31
GABPA-203ENST00000487266 TBC1D17Q9HA65 648 aa17■□□□□ 0.31
GABPA-203ENST00000487266 HSFX1Q9UBD0 423 aa17■□□□□ 0.31
GABPA-203ENST00000487266 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
GABPA-203ENST00000487266 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
GABPA-203ENST00000487266 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
GABPA-203ENST00000487266 MICAL2O94851 1124 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 AOC1P19801 751 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 CYP2F1P24903 491 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 TUFMP49411 452 aaKnown RBP16.99■□□□□ 0.31
GABPA-203ENST00000487266 NHLH1Q02575 133 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 SLC9A9Q8IVB4 645 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 ENGASEQ8NFI3 743 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 C2orf15Q8WU43 125 aaKnown RBP16.99■□□□□ 0.31
GABPA-203ENST00000487266 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
GABPA-203ENST00000487266 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
GABPA-203ENST00000487266 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms