RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 N4BP3O15049 544 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 ZNF883P0CG24 379 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 HLA-EP13747 358 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CPB1P15086 417 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CYP4F8P98187 520 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CYP4A11Q02928 519 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 ZNF33AQ06730 810 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 SCRN1Q12765 414 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 DUSP4Q13115 394 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 PSMD2Q13200 908 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 C2orf27AQ580R0 203 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CENPPQ6IPU0 288 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 OTUD6AQ7L8S5 288 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
TRIM56-204ENST00000487252 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
TRIM56-204ENST00000487252 PODXLO00592 558 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 RRP8O43159 456 aaKnown RBP12.78□□□□□ -0.36
TRIM56-204ENST00000487252 OAZ2O95190 189 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 TDP2O95551 362 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 GPR17Q13304 367 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 RTN1Q16799 776 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 SLC41A1Q8IVJ1 513 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-204ENST00000487252 DDX12PQ92771 950 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 LXNQ9BS40 222 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 KIF9Q9HAQ2 790 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 GDAQ9Y2T3 454 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 OBSL1O75147 1896 aa12.78□□□□□ -0.36
TRIM56-204ENST00000487252 MARCH6O60337 910 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 CDC25CP30307 473 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 IL12RB1P42701 662 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
TRIM56-204ENST00000487252 RHDQ02161 417 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 RPL6Q02878 288 aaKnown RBP12.77□□□□□ -0.37
TRIM56-204ENST00000487252 TLE3Q04726 772 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-204ENST00000487252 PTPRNQ16849 979 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 PKDCCQ504Y2 493 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 APPL2Q8NEU8 664 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 BICD2Q8TD16 824 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 NXPE2Q96DL1 559 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 CDC6Q99741 560 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-204ENST00000487252 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 IL17BQ9UHF5 180 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 DOPEY1Q5JWR5 2465 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
TRIM56-204ENST00000487252 SGK1O00141 431 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 PLK4O00444 970 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 SLC28A2O43868 658 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 DGAT1O75907 488 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 EDN1P05305 212 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 CDC27P30260 824 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
TRIM56-204ENST00000487252 OPRD1P41143 372 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 GRIK2Q13002 908 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 HSF5Q4G112 596 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-204ENST00000487252 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-204ENST00000487252 EEF1DP3Q658K8 133 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 CC2D1AQ6P1N0 951 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-204ENST00000487252 SLC36A4Q6YBV0 504 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 ITIH5Q86UX2 942 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 TTC9BQ8N6N2 239 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 IL17RCQ8NAC3 791 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 TBCKQ8TEA7 893 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 BRPF3Q9ULD4 1205 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-204ENST00000487252 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
TRIM56-204ENST00000487252 MTMR11A4FU01 709 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 KRT38O76015 456 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 OR4Q2P0C623 313 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 AVPR1AP37288 418 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 SEC13P55735 322 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 EPHA7Q15375 998 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 GAB4Q2WGN9 574 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 EML3Q32P44 896 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 TMPRSS12Q86WS5 348 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 SETD7Q8WTS6 366 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms