RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 LIG4P49917 911 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CLCNKBP51801 687 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SOX4Q06945 474 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SCAPQ12770 1279 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 KYAT1Q16773 422 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 UPP1Q16831 310 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM171A1Q5VUB5 890 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PDXDC1Q6P996 788 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 TXNDC11Q6PKC3 985 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SV2BQ7L1I2 683 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 DYMQ7RTS9 669 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CEP57Q86XR8 500 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 MAP4K3Q8IVH8 894 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SPEM1Q8N4L4 309 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CHCHD4Q8N4Q1 142 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 PIK3R5Q8WYR1 880 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 DDX12PQ92771 950 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 TCEAL4Q96EI5 215 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ZSWIM3Q96MP5 696 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ZMAT2Q96NC0 199 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 FIZ1Q96SL8 496 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CLSTN3Q9BQT9 956 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 HAPLN2Q9GZV7 340 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ST6GALNAC4Q9H4F1 302 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 GOLGA2P5Q9HBQ8 144 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ZNF334Q9HCZ1 680 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 SEL1LQ9UBV2 794 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 FBXW11Q9UKB1 542 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 TBX20Q9UMR3 447 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 MRPS17Q9Y2R5 130 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 CITO14578 2027 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 ACACAQ13085 2346 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 TNRC6BQ9UPQ9 1833 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 TRIP11Q15643 1979 aa6.99□□□□□ -1.29
CTDSPL-208ENST00000486978 MYO16Q9Y6X6 1858 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PTPRDP23468 1912 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 A0A087X0B3 334 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 MYMKA6NI61 221 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PYCARD-AS1I3L0S3 204 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 ARNTLO00327 626 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PODXLO00592 558 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 OGTO15294 1046 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 MEFVO15553 781 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 TRAPPC3O43617 180 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 F13A1P00488 732 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 CLTAP09496 248 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 CXCL8P10145 99 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 GAP43P17677 238 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 CSRP1P21291 193 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 FGFR3P22607 806 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 NMT1P30419 496 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 RPL9P32969 192 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 STAT6P42226 847 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 GTF2BQ00403 316 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PSMD5Q16401 504 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 SLC10A6Q3KNW5 377 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 SEZ6Q53EL9 994 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 CACNA2D4Q7Z3S7 1137 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 SFR1Q86XK3 245 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 C3orf58Q8NDZ4 430 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 LNX1Q8TBB1 728 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 MDM1Q8TC05 714 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 GAB3Q8WWW8 586 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 HVCN1Q96D96 273 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 DNAJC19Q96DA6 116 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 RSPRY1Q96DX4 576 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 LOXL4Q96JB6 756 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PLEKHA5Q9HAU0 1116 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 TFIP11Q9UBB9 837 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PIAS3Q9Y6X2 628 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 PI4KAP42356 2102 aa6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 URB1O60287 2271 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-208ENST00000486978 A0A0B4J269 797 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 TTC26A0AVF1 554 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 FRMD3A2A2Y4 597 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 MAN2B1O00754 1011 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 XPOTO43592 962 aaKnown RBP6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 FAM189A1O60320 539 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 CUTAO60888 179 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 RPP40O75818 363 aaKnown RBP6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 C8AP07357 584 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 TKTP29401 623 aaKnown RBP6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 GDI1P31150 447 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 TNFSF9P41273 254 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 VIPR2P41587 438 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 CCR2P41597 374 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 BRCC3P46736 316 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 PPP2R5DQ14738 602 aa6.97□□□□□ -1.29
CTDSPL-208ENST00000486978 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms