RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 MYO9AB2RTY4 2548 aa5.93□□□□□ -1.46
SF1-217ENST00000486960 UBR5O95071 2799 aaPredicted RBP5.93□□□□□ -1.46
SF1-217ENST00000486960 CNOT1A5YKK6 2376 aaKnown RBP5.93□□□□□ -1.46
SF1-217ENST00000486960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 CLRN2A0PK11 232 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 KRBA1A5PL33 1030 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 EPOPA6NHQ4 379 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PRPSAP2O60256 369 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 RNF40O75150 1001 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 SMC2O95347 1197 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ADCY5O95622 1261 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 SNRNP70P08621 437 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 PORP16435 677 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 CHMP24386 653 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NOS3P29474 1203 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PDIA3P30101 505 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 ETV1P50549 477 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 CASP6P55212 293 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 OCRLQ01968 901 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NMIQ13287 307 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 FAM110CQ1W6H9 321 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 CLEC16AQ2KHT3 1053 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ZNF674Q2M3X9 581 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ALG11Q2TAA5 492 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 LILRA6Q6PI73 481 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PACS1Q6VY07 963 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NSMFQ6X4W1 530 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 RGS9BPQ6ZS82 235 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 B4GALNT4Q76KP1 1039 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PRPF39Q86UA1 669 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 CCDC13Q8IYE1 715 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 SIMC1Q8NDZ2 872 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 GSTCDQ8NEC7 633 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PLBD2Q8NHP8 589 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PPP1R35Q8TAP8 253 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 GRIN3AQ8TCU5 1115 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 FAM216AQ8WUB2 273 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 HTRA1Q92743 480 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 FATE1Q969F0 183 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NRBF2Q96F24 287 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ZBED3Q96IU2 234 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 CCDC74BQ96LY2 380 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 MAGEB10Q96LZ2 347 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 TEKT5Q96M29 485 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 MAP7D2Q96T17 732 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 SH3GL1Q99961 368 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 CNPPD1Q9BV87 410 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 HERC2P3Q9BVR0 1158 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 SORBS1Q9BX66 1292 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 CAPS2Q9BXY5 557 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 TRIM7Q9C029 511 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NACA2Q9H009 215 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 C1orf21Q9H246 121 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 NKX2-4Q9H2Z4 354 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 VCPKMTQ9H867 229 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PDE7BQ9NP56 450 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 DDX18Q9NVP1 670 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 UBAP1Q9NZ09 502 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 LRFN1Q9P244 771 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ADD3Q9UEY8 706 aaKnown RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 ADGRE2Q9UHX3 823 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 ITGB1BP2Q9UKP3 347 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PCDHB12Q9Y5F1 795 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PCDHAC2Q9Y5I4 1007 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 V9GYY5 206 aaPredicted RBP5.92□□□□□ -1.46
SF1-217ENST00000486960 GAKO14976 1311 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 FANCIQ9NVI1 1328 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 RALGAPA2Q2PPJ7 1873 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 HEG1Q9ULI3 1381 aa5.92□□□□□ -1.46
SF1-217ENST00000486960 PHIPQ8WWQ0 1821 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 A0A1W2PPL8 197 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 PRODHO43272 600 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 MTSS1O43312 755 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 FMO6PO60774 539 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 GAS7O60861 476 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 KERAO60938 352 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 EPN2O95208 641 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 STAU1O95793 577 aaKnown RBP5.91□□□□□ -1.46
SF1-217ENST00000486960 CHGBP05060 677 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 THP07101 528 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 QDPRP09417 244 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 PABPC1P11940 636 aaKnown RBP5.91□□□□□ -1.46
SF1-217ENST00000486960 HOXA11P31270 313 aaPredicted RBP5.91□□□□□ -1.46
SF1-217ENST00000486960 PRKAR2BP31323 418 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 NBL1P41271 181 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 MTIF2P46199 727 aaKnown RBP5.91□□□□□ -1.46
SF1-217ENST00000486960 LSSP48449 732 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 RPIAP49247 311 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 GPC3P51654 580 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 CCNA1P78396 465 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 GBE1Q04446 702 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 RELQ04864 619 aaPredicted RBP5.91□□□□□ -1.46
SF1-217ENST00000486960 SGCGQ13326 291 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 SLC14A1Q13336 389 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 LAPTM5Q13571 262 aa5.91□□□□□ -1.46
SF1-217ENST00000486960 VGLL4Q14135 290 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms