RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 APTXQ7Z2E3 356 aaKnown RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 UNC93AQ86WB7 457 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 DCP1BQ8IZD4 617 aaKnown RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 TXLNBQ8N3L3 684 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 MSANTD4Q8NCY6 345 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 GSTCDQ8NEC7 633 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 CCDC112Q8NEF3 446 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 SPATA18Q8TC71 538 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 SEMA4DQ92854 862 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 ZNF689Q96CS4 500 aaPredicted RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 SENP8Q96LD8 212 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 CCDC42Q96M95 316 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 NT5C1AQ9BXI3 368 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 SEPT11Q9NVA2 429 aaKnown RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 GDAP2Q9NXN4 497 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 HESX1Q9UBX0 185 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 SIX4Q9UIU6 781 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 KIAA1257Q9ULG3 409 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 BARX2Q9UMQ3 279 aaPredicted RBP7.42□□□□□ -1.22
UBR4-214ENST00000486515 SIK3Q9Y2K2 1263 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 ATP8B3O60423 1300 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 PTPRJQ12913 1337 aa7.42□□□□□ -1.22
UBR4-214ENST00000486515 SPDYE4A6NLX3 237 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 LRRC53A6NM62 1247 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 NT5C1B-RDH14C9J2C7 533 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 F8VZ95 297 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TACC1O75410 805 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 GFPT2O94808 682 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 RB1P06400 928 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TYMPP19971 482 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TNFAIP3P21580 790 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 CYLC1P35663 651 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 SOX5P35711 763 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 KLK7P49862 253 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 ADKP55263 362 aaKnown RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 HTRA4P83105 476 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 SOX4Q06945 474 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 STILQ15468 1287 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 SPA17Q15506 151 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PTPN21Q16825 1174 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 CTXN3Q4LDR2 81 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 ZNF394Q53GI3 561 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 FAM171A1Q5VUB5 890 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 OVOS1Q6IE37 1185 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 ZNF280DQ6N043 979 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PPP1R2P3Q6NXS1 205 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 FUT10Q6P4F1 479 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 CYP26C1Q6V0L0 522 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 ANKS3Q6ZW76 656 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TMC7Q7Z402 723 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TMCO2Q7Z6W1 182 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 ARHGEF19Q8IW93 802 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 COLGALT1Q8NBJ5 622 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 RABGGTAQ92696 567 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 SYN2Q92777 582 aaPredicted RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 TATDN2Q93075 761 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TMEM176AQ96HP8 235 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 SUSD3Q96L08 255 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 NOX5Q96PH1 765 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TGS1Q96RS0 853 aaKnown RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 MED10Q9BTT4 135 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 TTPALQ9BTX7 342 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBR4-214ENST00000486515 NKX2-4Q9H2Z4 354 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 MRPL17Q9NRX2 175 aaKnown RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 CISHQ9NSE2 258 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 DDX43Q9NXZ2 648 aaKnown RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 DNAJB4Q9UDY4 337 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 POLIQ9UNA4 740 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
UBR4-214ENST00000486515 COL4A6Q14031 1691 aa7.41□□□□□ -1.22
UBR4-214ENST00000486515 OR6C75A6NL08 312 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 AP5Z1O43299 807 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 THAP12O43422 761 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 AKR1B10O60218 316 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 MFAP3LO75121 409 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 FGF18O76093 207 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 GYPCP04921 128 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 SERPING1P05155 500 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 PAEPP09466 180 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 PDGFRBP09619 1106 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 VDRP11473 427 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CPB1P15086 417 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 DESP17661 470 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 WARSP23381 471 aaKnown RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 GNA15P30679 374 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 ELF1P32519 619 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 BMPR1AP36894 532 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 PBX1P40424 430 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms