RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 TMEM86AQ8N2M4 240 aa21.01■□□□□ 0.95
SNX5-213ENST00000486039 TOP6BLQ8N6T0 577 aa21.01■□□□□ 0.95
SNX5-213ENST00000486039 HPDLQ96IR7 371 aa21.01■□□□□ 0.95
SNX5-213ENST00000486039 TMLHEQ9NVH6 421 aa21.01■□□□□ 0.95
SNX5-213ENST00000486039 DDX43Q9NXZ2 648 aaKnown RBP21.01■□□□□ 0.95
SNX5-213ENST00000486039 GDE1Q9NZC3 331 aa21.01■□□□□ 0.95
SNX5-213ENST00000486039 ZNF197O14709 1029 aa21■□□□□ 0.95
SNX5-213ENST00000486039 PRPF40AO75400 957 aaKnown RBP21■□□□□ 0.95
SNX5-213ENST00000486039 MYL4P12829 197 aa21■□□□□ 0.95
SNX5-213ENST00000486039 GJA1P17302 382 aa21■□□□□ 0.95
SNX5-213ENST00000486039 AOC1P19801 751 aa21■□□□□ 0.95
SNX5-213ENST00000486039 CASP4P49662 377 aa21■□□□□ 0.95
SNX5-213ENST00000486039 EPHB3P54753 998 aa21■□□□□ 0.95
SNX5-213ENST00000486039 SNW1Q13573 536 aaKnown RBP21■□□□□ 0.95
SNX5-213ENST00000486039 KCNB1Q14721 858 aa21■□□□□ 0.95
SNX5-213ENST00000486039 LIMS2Q7Z4I7 341 aa21■□□□□ 0.95
SNX5-213ENST00000486039 TMC8Q8IU68 726 aa21■□□□□ 0.95
SNX5-213ENST00000486039 DCP1BQ8IZD4 617 aaKnown RBP21■□□□□ 0.95
SNX5-213ENST00000486039 SIX5Q8N196 739 aa21■□□□□ 0.95
SNX5-213ENST00000486039 LEMD2Q8NC56 503 aa21■□□□□ 0.95
SNX5-213ENST00000486039 ENGASEQ8NFI3 743 aa21■□□□□ 0.95
SNX5-213ENST00000486039 CCDC47Q96A33 483 aaKnown RBP21■□□□□ 0.95
SNX5-213ENST00000486039 SEPT5Q99719 369 aaPredicted RBP21■□□□□ 0.95
SNX5-213ENST00000486039 ACBD6Q9BR61 282 aa21■□□□□ 0.95
SNX5-213ENST00000486039 ASAH2Q9NR71 780 aa21■□□□□ 0.95
SNX5-213ENST00000486039 WNT16Q9UBV4 365 aa21■□□□□ 0.95
SNX5-213ENST00000486039 R3HCC1Q9Y3T6 440 aaKnown RBP21■□□□□ 0.95
SNX5-213ENST00000486039 GABRDO14764 452 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 HCRTO43612 131 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 PI15O43692 258 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 ACAT1P24752 427 aaKnown RBP20.99■□□□□ 0.95
SNX5-213ENST00000486039 SMARCB1Q12824 385 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 MGAT5BQ3V5L5 792 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 ADGRF2Q8IZF7 708 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 SPATA18Q8TC71 538 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 SPPL2BQ8TCT7 592 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 GPR152Q8TDT2 470 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 C2orf15Q8WU43 125 aaKnown RBP20.99■□□□□ 0.95
SNX5-213ENST00000486039 ZSWIM3Q96MP5 696 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 KXD1Q9BQD3 176 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 MAPK8IP1Q9UQF2 711 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 CACNA1HO95180 2353 aa20.99■□□□□ 0.95
SNX5-213ENST00000486039 GOLGA6L4A6NEF3 574 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 GFRA3O60609 400 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 NR3C1P04150 777 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 HAPLN1P10915 354 aaPredicted RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 ATF6P18850 670 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 TUFMP49411 452 aaKnown RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 GPC5P78333 572 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 MYL7Q01449 175 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 TSPY1Q01534 308 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 PNOCQ13519 176 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 INTS6LQ5JSJ4 861 aaKnown RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 DPH6Q7L8W6 267 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 DNAJB7Q7Z6W7 309 aaPredicted RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 SHKBP1Q8TBC3 707 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 PARD3BQ8TEW8 1205 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 KBTBD7Q8WVZ9 684 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 PSMG2Q969U7 264 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 PKMYT1Q99640 499 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 LPIN3Q9BQK8 851 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 PLA2G2FQ9BZM2 168 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 ZNF334Q9HCZ1 680 aaPredicted RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 SLC2A4RGQ9NR83 387 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 ABI2Q9NYB9 513 aaPredicted RBP20.98■□□□□ 0.95
SNX5-213ENST00000486039 TRAF3IP3Q9Y228 551 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 ASB3Q9Y575 518 aa20.98■□□□□ 0.95
SNX5-213ENST00000486039 KRBA1A5PL33 1030 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 LRRIQ3A6PVS8 624 aaPredicted RBP20.97■□□□□ 0.95
SNX5-213ENST00000486039 PROB1E7EW31 1015 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 LHX1P48742 406 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 CLDN10P78369 228 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 TEAD2Q15562 447 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 CCDC142Q17RM4 750 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 FAM78AQ5JUQ0 283 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 TANGO2Q6ICL3 276 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 CA14Q9ULX7 337 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 PCDHB5Q9Y5E4 795 aa20.97■□□□□ 0.95
SNX5-213ENST00000486039 A0A1W2PRU2 124 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 CALUO43852 315 aaPredicted RBP20.96■□□□□ 0.95
SNX5-213ENST00000486039 ECI2O75521 394 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 KIF20AO95235 890 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 FCARP24071 287 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 LMO2P25791 158 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 DLG4P78352 724 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 NFE2Q16621 373 aaPredicted RBP20.96■□□□□ 0.95
SNX5-213ENST00000486039 CCDC105Q8IYK2 499 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 GUF1Q8N442 669 aaKnown RBP20.96■□□□□ 0.95
SNX5-213ENST00000486039 ASB16Q96NS5 453 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 PI4K2AQ9BTU6 479 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 GTF3C4Q9UKN8 822 aa20.96■□□□□ 0.95
SNX5-213ENST00000486039 MYBPHLA2RUH7 354 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 C4BPAP04003 597 aaKnown RBP20.95■□□□□ 0.94
SNX5-213ENST00000486039 NBL1P41271 181 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 MYL6P60660 151 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 FAM160A1Q05DH4 1040 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 NFIL3Q16649 462 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 TDRD10Q5VZ19 366 aaKnown RBP20.95■□□□□ 0.94
SNX5-213ENST00000486039 CEP135Q66GS9 1140 aa20.95■□□□□ 0.94
SNX5-213ENST00000486039 GAREM2Q75VX8 874 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms