RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CCDC192P0DO97 292 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 P4HA1P13674 534 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 RDXP35241 583 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 ECE1P42892 770 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TNNT3P45378 269 aaPredicted RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MAN2A2P49641 1150 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CORO7P57737 925 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 BTKQ06187 659 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 GTF2H3Q13889 308 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TOB2Q14106 344 aaPredicted RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 GCKRQ14397 625 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 PRSS53Q2L4Q9 553 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SV2CQ496J9 727 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 ODF2Q5BJF6 829 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC122Q5T0U0 273 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 C10orf76Q5T2E6 689 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SYDE2Q5VT97 1194 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MRM1Q6IN84 353 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 BLOC1S2Q6QNY1 142 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 FIP1L1Q6UN15 594 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC91Q7Z6B0 441 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 B3GNT8Q7Z7M8 397 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 AACSQ86V21 672 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 VSIG1Q86XK7 387 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC83Q8IWF9 413 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 FAM178BQ8IXR5 827 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 AHI1Q8N157 1196 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SMARCC2Q8TAQ2 1214 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 NSUN6Q8TEA1 469 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 LEO1Q8WVC0 666 aaPredicted RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 ALG3Q92685 438 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 COPS5Q92905 334 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SUCLG2Q96I99 432 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 RADILQ96JH8 1075 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CLMNQ96JQ2 1002 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MRGPRX3Q96LB0 322 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 NCAPGQ9BPX3 1015 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC39A3Q9BRY0 314 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 BICC1Q9H694 974 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TCF7L2Q9NQB0 619 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 STARD7Q9NQZ5 370 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 USP40Q9NVE5 1235 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 HPF1Q9NWY4 346 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MARCH2Q9P0N8 246 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TMEFF2Q9UIK5 374 aaPredicted RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TRAF3IP3Q9Y228 551 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 CRYL1Q9Y2S2 319 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 MRPL11Q9Y3B7 192 aaKnown RBP4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 N6AMT1Q9Y5N5 214 aa4.38□□□□□ -1.71
PRPF38B-205ENST00000485810 TCHHQ07283 1943 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SH3TC1Q8TE82 1336 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 PALLDQ8WX93 1383 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 A0A0D9SFI3 127 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 GOLGA6L10A0A0M3HER8 536 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 LINC00854A0A1B0GVQ3 168 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC66A2RUB6 948 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 AKR1B15C9JRZ8 316 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 C1QTNF3-AMACRE9PGA6 284 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 M0R3H8 397 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 GABRDO14764 452 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 AREL1O15033 823 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 GPR39O43194 453 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 CTIFO43310 598 aaKnown RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 NPHS1O60500 1241 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 USO1O60763 962 aaKnown RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 PPFIA2O75334 1257 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 KRT38O76015 456 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 FBXO21O94952 628 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 GUCA1CO95843 209 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 CYP17A1P05093 508 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ITGAVP06756 1048 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 PF4V1P10720 104 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 TMOD1P28289 359 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ECI1P42126 302 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 MXI1P50539 228 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 RCAN1P53805 252 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ATXN1P54253 815 aaKnown RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 UBXN1Q04323 297 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 RESTQ13127 1097 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 NCAPHQ15003 741 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ACAP1Q15027 740 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 TERF2Q15554 542 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 PROSER3Q2NL68 480 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SETMARQ53H47 684 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC45A4Q5BKX6 768 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 MUM1L1Q5H9M0 696 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 NAA16Q6N069 864 aaPredicted RBP4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF790Q6PG37 636 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SARM1Q6SZW1 724 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 KDELC1Q6UW63 502 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SYNE3Q6ZMZ3 975 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 RAPH1Q70E73 1250 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SPATC1Q76KD6 591 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 STRA8Q7Z7C7 330 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 PLA2G4DQ86XP0 818 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 SLC41A1Q8IVJ1 513 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 TRIM59Q8IWR1 403 aa4.37□□□□□ -1.71
PRPF38B-205ENST00000485810 COLGALT2Q8IYK4 626 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms