RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.91□□□□□ -1.62
RTN4-213ENST00000485749 V9GYY5 206 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 BRD4O60885 1362 aaPredicted RBP4.91□□□□□ -1.62
RTN4-213ENST00000485749 SMARCA4P51532 1647 aa4.9□□□□□ -1.62
RTN4-213ENST00000485749 CUX2O14529 1486 aa4.9□□□□□ -1.62
RTN4-213ENST00000485749 OR14I1A6ND48 311 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 A6NLC8 198 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TBKBP1A7MCY6 615 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 RBAK-RBAKDNI3L0D1 243 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 UBXN8O00124 270 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 HRKO00198 91 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 NKRFO15226 690 aaKnown RBP eCLIP4.9□□□□□ -1.63
RTN4-213ENST00000485749 THAP12O43422 761 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 STX6O43752 255 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 CEP104O60308 925 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 GOSR1O95249 250 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TBX18O95935 607 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 DHRS4L1P0CG22 281 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ALOX12P18054 663 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ARF4P18085 180 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 MAPK3P27361 379 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 PEX2P28328 305 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 SKIV2L2P42285 1042 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 CORO7P57737 925 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 IL1RL1Q01638 556 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ALDH6A1Q02252 535 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 KLHL30Q0D2K2 578 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 NFIXQ14938 502 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ARHGEF6Q15052 776 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 POLD3Q15054 466 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 UAP1L1Q3KQV9 507 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 SPDYCQ5MJ68 293 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 CCDC183Q5T5S1 534 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TTC19Q6DKK2 380 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 SHQ1Q6PI26 577 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 OLFML1Q6UWY5 402 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 OLFM4Q6UX06 510 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 SEPT14Q6ZU15 432 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 KRT74Q7RTS7 529 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TRIM74Q86UV6 250 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TRIM73Q86UV7 250 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 GBP7Q8N8V2 638 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 FAM184AQ8NB25 1140 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 GOT1L1Q8NHS2 421 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 PPP1R35Q8TAP8 253 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 FAM76AQ8TAV0 307 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TEKT4Q8WW24 435 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 LRTOMTQ8WZ04 291 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 PHKBQ93100 1093 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 EAF2Q96CJ1 260 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 CNDP1Q96KN2 507 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 RBM14Q96PK6 669 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 EYA3Q99504 573 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 PTPN18Q99952 460 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 B3GNT5Q9BYG0 378 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TXLNGYQ9BZA5 131 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 FOXP3Q9BZS1 431 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 TRIM7Q9C029 511 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 QRSL1Q9H0R6 528 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 STMN4Q9H169 189 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 SMOC1Q9H4F8 434 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 PDLIM7Q9NR12 457 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 EIF2B4Q9UI10 523 aaKnown RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 SERPINB13Q9UIV8 391 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 GPR160Q9UJ42 338 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 SLC13A4Q9UKG4 626 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 C19orf53Q9UNZ5 99 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 COG5Q9UP83 839 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 POLHQ9Y253 713 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ATP11BQ9Y2G3 1177 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ZNF281Q9Y2X9 895 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 JRKLQ9Y4A0 524 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 SNX8Q9Y5X2 465 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 ZFP37Q9Y6Q3 630 aaPredicted RBP4.9□□□□□ -1.63
RTN4-213ENST00000485749 AP1M2Q9Y6Q5 423 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 NUMBLQ9Y6R0 609 aa4.9□□□□□ -1.63
RTN4-213ENST00000485749 LRRC14BA6NHZ5 514 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 WASH4PA8MWX3 477 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 CACNB4O00305 520 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 MCF2LO15068 1137 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 TXNL1O43396 289 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 FSBPO95073 299 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 PAHP00439 452 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 COL6A2P12110 1019 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HDCP19113 662 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HLA-DPA1P20036 260 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HTR1BP28222 390 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 PBLDP30039 288 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 PPM1AP35813 382 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 CTCFP49711 727 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 CLCN2P51788 898 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 HERVK_113P62684 666 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 TMEM132BQ14DG7 1078 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 CNN3Q15417 329 aaKnown RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 CHRNA2Q15822 529 aa4.89□□□□□ -1.63
RTN4-213ENST00000485749 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 C15orf59Q2T9L4 293 aaPredicted RBP4.89□□□□□ -1.63
RTN4-213ENST00000485749 CT83Q5H943 113 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms