RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 ZNF720Q7Z2F6 126 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 TMC8Q8IU68 726 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 GPR161Q8N6U8 529 aaKnown RBP14.31□□□□□ -0.12
UBA3-210ENST00000485424 CACTINQ8WUQ7 758 aaKnown RBP14.31□□□□□ -0.12
UBA3-210ENST00000485424 FAM3CQ92520 227 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 SECISBP2LQ93073 1101 aaKnown RBP14.31□□□□□ -0.12
UBA3-210ENST00000485424 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 IER2Q9BTL4 223 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 CRISPLD1Q9H336 500 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 ATXN3LQ9H3M9 355 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 ZSCAN16Q9H4T2 348 aaPredicted RBP14.31□□□□□ -0.12
UBA3-210ENST00000485424 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
UBA3-210ENST00000485424 PCDHB13Q9Y5F0 798 aa14.31□□□□□ -0.12
UBA3-210ENST00000485424 HEPACAM2A8MVW5 462 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 TISP43B9A030 160 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 PIRO00625 290 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 TGM1P22735 817 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
UBA3-210ENST00000485424 RESTQ13127 1097 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 ALCAMQ13740 583 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 STK38Q15208 465 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
UBA3-210ENST00000485424 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 NT5DC4Q86YG4 428 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 MFSD6LQ8IWD5 586 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 DCP1BQ8IZD4 617 aaKnown RBP14.3□□□□□ -0.12
UBA3-210ENST00000485424 ATAD1Q8NBU5 361 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 RSPRY1Q96DX4 576 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
UBA3-210ENST00000485424 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 FIZ1Q96SL8 496 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 FAM213AQ9BRX8 229 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 LRRC3Q9BY71 257 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 DNAJC25Q9H1X3 360 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 HSFX1Q9UBD0 423 aa14.3□□□□□ -0.12
UBA3-210ENST00000485424 TNRC6BQ9UPQ9 1833 aaKnown RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 MYO18AQ92614 2054 aaKnown RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 PI4KAP42356 2102 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 ANO9A1A5B4 782 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 MYMKA6NI61 221 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 KPNA7A9QM74 516 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 CYP11A1P05108 521 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 GABRR2P28476 465 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 PNPLA4P41247 253 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 CCR3P51677 355 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 KPNA1P52294 538 aaPredicted RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 LMNB2Q03252 620 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 SMARCB1Q12824 385 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 STXBP5Q5T5C0 1151 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 GPR158Q5T848 1215 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 CCDC65Q8IXS2 484 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 SPPL2BQ8TCT7 592 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 C2orf15Q8WU43 125 aaKnown RBP14.29□□□□□ -0.12
UBA3-210ENST00000485424 PSMG2Q969U7 264 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 LRRC27Q9C0I9 530 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 GMEB2Q9UKD1 530 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 STYXL1Q9Y6J8 313 aa14.29□□□□□ -0.12
UBA3-210ENST00000485424 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
UBA3-210ENST00000485424 STX6O43752 255 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 SOAT2O75908 522 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 KRT19P08727 400 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 CHRNB1P11230 501 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 CCNE1P24864 410 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 CDC25CP30307 473 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 NRLP54845 237 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 TSPY1Q01534 308 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 SATB1Q01826 763 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 FCHO2Q0JRZ9 810 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 GAS6Q14393 721 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 LPAL2Q16609 132 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 TTC9BQ8N6N2 239 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 PDILTQ8N807 584 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 SAAL1Q96ER3 474 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 MSANTD3Q96H12 275 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 ZCWPW1Q9H0M4 648 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 TMEM206Q9H813 350 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 OLFML3Q9NRN5 406 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
UBA3-210ENST00000485424 RBAKQ9NYW8 714 aaPredicted RBP14.28□□□□□ -0.12
UBA3-210ENST00000485424 CDV3Q9UKY7 258 aaKnown RBP14.28□□□□□ -0.12
UBA3-210ENST00000485424 PLXND1Q9Y4D7 1925 aa14.28□□□□□ -0.12
UBA3-210ENST00000485424 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 CHADO15335 359 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 PPP1R37O75864 691 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 ITGB3P05106 788 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.13
UBA3-210ENST00000485424 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 SDHBP21912 280 aa14.27□□□□□ -0.13
UBA3-210ENST00000485424 GARTP22102 1010 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms