RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LRRTM3Q86VH5 581 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 OSTM1Q86WC4 334 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 GJD3Q8N144 294 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 FEZF2Q8TBJ5 459 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 NECAB3Q96P71 396 aaPredicted RBP19.05■□□□□ 0.64
SREBF1-213ENST00000485080 TMEM209Q96SK2 561 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 COQ4Q9Y3A0 265 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 NR2E1Q9Y466 385 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 INSL5Q9Y5Q6 135 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 DOCK6Q96HP0 2047 aa19.05■□□□□ 0.64
SREBF1-213ENST00000485080 TRIOO75962 3097 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 WEE2P0C1S8 567 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 P4HA1P13674 534 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 ERCC5P28715 1186 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-213ENST00000485080 INTS6LQ5JSJ4 861 aaKnown RBP19.04■□□□□ 0.64
SREBF1-213ENST00000485080 FAM171BQ6P995 826 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 SPPL2BQ8TCT7 592 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 SLC35C1Q96A29 364 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 MED15Q96RN5 788 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 MMS19Q96T76 1030 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 ABCB6Q9NP58 842 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 DACH1Q9UI36 760 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 CDH9Q9ULB4 789 aa19.04■□□□□ 0.64
SREBF1-213ENST00000485080 CLUHO75153 1309 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 LRG1P02750 347 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 TUFMP49411 452 aaKnown RBP19.03■□□□□ 0.64
SREBF1-213ENST00000485080 MXI1P50539 228 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 STX17P56962 302 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 DUSP4Q13115 394 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 PLD1Q13393 1074 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 SLC39A12Q504Y0 691 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 ATAD1Q8NBU5 361 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 TAS1R2Q8TE23 839 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 CRISPLD1Q9H336 500 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 FAM124BQ9H5Z6 455 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-213ENST00000485080 PIDD1Q9HB75 910 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 CD320Q9NPF0 282 aa19.03■□□□□ 0.64
SREBF1-213ENST00000485080 DOCK8Q8NF50 2099 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 NOTCH4Q99466 2003 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 CCL16O15467 120 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 GNL1P36915 607 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 PIK3CAP42336 1068 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 MAPRE1Q15691 268 aaKnown RBP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 DPCR1Q3MIW9 517 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 OTOP3Q7RTS5 596 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 TRIM59Q8IWR1 403 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 ZDHHC14Q8IZN3 488 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 FBXL13Q8NEE6 735 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 FUBP3Q96I24 572 aaKnown RBP eCLIP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 PGLYRP2Q96PD5 576 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 MRPL45Q9BRJ2 306 aaKnown RBP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 BCO2Q9BYV7 579 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 IMPG2Q9BZV3 1241 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.64
SREBF1-213ENST00000485080 YIPF1Q9Y548 306 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 ASB3Q9Y575 518 aa19.02■□□□□ 0.64
SREBF1-213ENST00000485080 P4HA2O15460 535 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 MICAL2O94851 1124 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 LMO2P25791 158 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 EPHA5P54756 1037 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 CFAP221Q4G0U5 840 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 CCDC183Q5T5S1 534 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 PLCD3Q8N3E9 789 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 LEMD2Q8NC56 503 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 SYT15Q9BQS2 421 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 SNX25Q9H3E2 840 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 CYP3A43Q9HB55 503 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 TMLHEQ9NVH6 421 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 RAB20Q9NX57 234 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 DNMT3BQ9UBC3 853 aaKnown RBP19.01■□□□□ 0.63
SREBF1-213ENST00000485080 POLIQ9UNA4 740 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 NME7Q9Y5B8 376 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 PCDHB5Q9Y5E4 795 aa19.01■□□□□ 0.63
SREBF1-213ENST00000485080 ZFP37Q9Y6Q3 630 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-213ENST00000485080 TNFRSF10AO00220 468 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 N4BP1O75113 896 aaKnown RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 CCDC192P0DO97 292 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 HAPLN1P10915 354 aaPredicted RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 PTPN2P17706 415 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 ASPAP45381 313 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 ALDH1A3P47895 512 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 NOP14P78316 857 aaKnown RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 TWF1Q12792 350 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 CCDC40Q4G0X9 1142 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 CBWD6Q4V339 395 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 DCAF17Q5H9S7 520 aaPredicted RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 CBWD3Q5JTY5 395 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 CBWD5Q5RIA9 395 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 TCERG1LQ5VWI1 586 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 GRASPQ7Z6J2 395 aaPredicted RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 ELMOD1Q8N336 334 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 MYCBPAPQ8TBZ2 947 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 SEMA4DQ92854 862 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 ACSF2Q96CM8 615 aaPredicted RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 RPGRIP1Q96KN7 1286 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 SMYD3Q9H7B4 428 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms