RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TNFSF4P23510 183 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CYP2C18P33260 490 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 PSMC6P62333 389 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 MBTPS1Q14703 1052 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 ACAP1Q15027 740 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 POSTNQ15063 836 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TAF12Q16514 161 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 USH1GQ495M9 461 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SLC30A6Q6NXT4 461 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 RUFY3Q7L099 469 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 BRAPQ7Z569 592 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SLC9B2Q86UD5 537 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TAX1BP1Q86VP1 789 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 DCLK2Q8N568 766 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SPATA18Q8TC71 538 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF606Q8WXB4 792 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SLC5A5Q92911 643 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 P2RX5Q93086 422 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CNDP2Q96KP4 475 aaKnown RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SPATA33Q96N06 139 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 UNC45AQ9H3U1 944 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 C1orf112Q9NSG2 853 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 ERAP1Q9NZ08 941 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 HDAC6Q9UBN7 1215 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGB2Q9Y5G2 931 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 IGKV6-21A0A0C4DH24 114 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 LPXNO60711 386 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GJB5O95377 273 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 PLEKHA8P1O95397 391 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CFBP00751 764 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SCG2P13521 617 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TMOD1P28289 359 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GNA11P29992 359 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 IRX5P78411 483 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TAP1Q03518 808 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 RTN1Q16799 776 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 HSDL1Q3SXM5 330 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 ANKDD1AQ495B1 522 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CEP55Q53EZ4 464 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SYNE3Q6ZMZ3 975 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 NEK10Q6ZWH5 1172 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 OVCH2Q7RTZ1 564 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 RAB11FIP4Q86YS3 637 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GPR65Q8IYL9 337 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 C7orf31Q8N865 590 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 GLIS3Q8NEA6 775 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 IL17RDQ8NFM7 739 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC148Q8NFR7 591 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 COPS5Q92905 334 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TOP1MTQ969P6 601 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 LENG9Q96B70 501 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 TRIM11Q96F44 468 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 CNDP1Q96KN2 507 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 SORBS1Q9BX66 1292 aaKnown RBP5.72□□□□□ -1.49
CCDC39-205ENST00000485055 PCSK1NQ9UHG2 260 aa5.72□□□□□ -1.49
CCDC39-205ENST00000485055 UMODL1Q5DID0 1318 aa5.71□□□□□ -1.49
CCDC39-205ENST00000485055 OPA1O60313 960 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 LYPLA2O95372 231 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SOD2P04179 222 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 DHRS4L1P0CG22 281 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 ADCY7P51828 1080 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 NLRP5P59047 1200 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 CYP4A11Q02928 519 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 UBXN1Q04323 297 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 C17orf67Q0P5P2 114 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 GALNT1Q10472 559 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 IKBKEQ14164 716 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 MAFAQ8NHW3 353 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 USP13Q92995 863 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 FAXDC2Q96IV6 333 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 FAM167AQ96KS9 214 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 KCNH6Q9H252 994 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 DISC1Q9NRI5 854 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 OLA1Q9NTK5 396 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 STK39Q9UEW8 545 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SH3BGRL2Q9UJC5 107 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF711Q9Y462 761 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 PLXNA4Q9HCM2 1894 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 ZBTB42B2RXF5 422 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 H7C0S8 307 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 HOXC11O43248 304 aaPredicted RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 HBP1O60381 514 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 H2AFYO75367 372 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 GJB3O75712 270 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 STBD1O95210 358 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 ATP2A2P16615 1042 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 BPIP17213 487 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 EIF2AK2P19525 551 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 ATP4AP20648 1035 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 PDIA3P30101 505 aaKnown RBP5.71□□□□□ -1.5
CCDC39-205ENST00000485055 GSTT1P30711 240 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 SFNP31947 248 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 KRT76Q01546 638 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 UBE3AQ05086 875 aa5.71□□□□□ -1.5
CCDC39-205ENST00000485055 KLHL30Q0D2K2 578 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms