RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 MAGEF1Q9HAY2 307 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 OBP2AQ9NY56 170 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 TFIP11Q9UBB9 837 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 NDRG2Q9UN36 371 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
SNRNP200-206ENST00000484372 A0A087X0B3 334 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 GOLGA8IPA6NC78 632 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 GOLGA8JA6NMD2 632 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 SOAT2O75908 522 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 TNNC2P02585 160 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 LHX1P48742 406 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 KPNA1P52294 538 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 BFSP1Q12934 665 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 ARHGAP29Q52LW3 1261 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 POTEHQ6S545 545 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 IPO9Q96P70 1041 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 ACBD6Q9BR61 282 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 C8orf33Q9H7E9 229 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 KBTBD4Q9NVX7 518 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
SNRNP200-206ENST00000484372 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 DMDP11532 3685 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 CSH1P0DML2 217 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 CSH2P0DML3 217 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 PCSK1P29120 753 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 WEE1P30291 646 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 NRLP54845 237 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 SNRPFP62306 86 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 PKP1Q13835 747 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 LRRC32Q14392 662 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 DUOXA2Q1HG44 320 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 TOP6BLQ8N6T0 577 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 FAM126AQ9BYI3 521 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 PDE11AQ9HCR9 933 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 ZSCAN32Q9NX65 697 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 UXTQ9UBK9 157 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 SNX9Q9Y5X1 595 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 F5P12259 2224 aa12.84□□□□□ -0.35
SNRNP200-206ENST00000484372 SCN1AP35498 2009 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 SOBPA7XYQ1 873 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 ATF6P18850 670 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 AVPR1AP37288 418 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 ME1P48163 572 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 E2F4Q16254 413 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 DPH6Q7L8W6 267 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 CELF5Q8N6W0 485 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 BPIFB1Q8TDL5 484 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 RUBCNQ92622 972 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 FNBP1Q96RU3 617 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 CHRDQ9H2X0 955 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 LMAN1LQ9HAT1 526 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 GDAP2Q9NXN4 497 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 UBE4BO95155 1302 aa12.83□□□□□ -0.36
SNRNP200-206ENST00000484372 ANK1P16157 1881 aa12.82□□□□□ -0.36
SNRNP200-206ENST00000484372 TCHHQ07283 1943 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms