RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNF569Q5MCW4 686 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 CCDC122Q5T0U0 273 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 KLHDC7AQ5VTJ3 777 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 TRIM65Q6PJ69 517 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 PRSS55Q6UWB4 352 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-216ENST00000484087 ZNF662Q6ZS27 426 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 POMGNT1Q8WZA1 660 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 BAP1Q92560 729 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 JAKMIP2Q96AA8 810 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 BORCS6Q96GS4 357 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 EPAS1Q99814 870 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 ADPGKQ9BRR6 497 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 TCHPQ9BT92 498 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 MRPL4Q9BYD3 311 aaKnown RBP7.44□□□□□ -1.22
BRCA1-216ENST00000484087 ADAM33Q9BZ11 813 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 GPR62Q9BZJ7 368 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 PCIF1Q9H4Z3 704 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 KIAA1586Q9HCI6 787 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 PTPRHQ9HD43 1115 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 HSPBP1Q9NZL4 362 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 AIPL1Q9NZN9 384 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 TUBGCP4Q9UGJ1 667 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 COG5Q9UP83 839 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 TNFSF13BQ9Y275 285 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 GIT1Q9Y2X7 761 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 HCFC2Q9Y5Z7 792 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 WDFY4Q6ZS81 3184 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 CTAGE9A4FU28 777 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 EPHB6O15197 1021 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MBTPS2O43462 519 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CLASP2O75122 1294 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CXCL14O95715 111 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SPATA31D3P0C874 917 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 UCHL3P15374 230 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 FERP16591 822 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SLC9A1P19634 815 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PROZP22891 400 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ANXA13P27216 316 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 EIF4A3P38919 411 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 STAT1P42224 750 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 BRCC3P46736 316 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CLCNKBP51801 687 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 KIF11P52732 1056 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 VAV2P52735 878 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 EFNA5P52803 228 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 WNT7BP56706 349 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 KRT17Q04695 432 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 UBE3AQ05086 875 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ENPEPQ07075 957 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 GRIK3Q13003 919 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SMC1AQ14683 1233 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 COL19A1Q14993 1142 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 DCAF4L1Q3SXM0 396 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 LEXMQ3ZCV2 418 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 RTP2Q5QGT7 225 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 C10orf76Q5T2E6 689 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SCARA3Q6AZY7 606 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 FUT10Q6P4F1 479 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MPZL3Q6UWV2 235 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SPATA31D4Q6ZUB0 917 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 EFHBQ8N7U6 833 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MNS1Q8NEH6 495 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ST13P5Q8NFI4 369 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MSLNLQ96KJ4 702 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SNX27Q96L92 541 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CBWD1Q9BRT8 395 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 GANQ9H2C0 597 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TMEM134Q9H6X4 195 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ARHGAP20Q9P2F6 1191 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 GUCA1BQ9UMX6 200 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 NCOR1O75376 2440 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SCN1AP35498 2009 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MTCL1Q9Y4B5 1905 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ZNF233A6NK53 670 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PPEF2O14830 753 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 INPPL1O15357 1258 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ADAM12O43184 909 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 NOL4O94818 638 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 LCA5LO95447 670 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 LDHAP00338 332 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CNPP09543 421 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TRIM49P0CI25 452 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TRIM49CP0CI26 452 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CTSAP10619 480 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 GRM5P41594 1212 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MAGEA1P43355 309 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ARID5AQ03989 594 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TUSC3Q13454 348 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 KCNC3Q14003 757 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PCBP1Q15365 356 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SNRNP35Q16560 246 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SYCE2Q6PIF2 218 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CD300LGQ6UXG3 332 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 DDX53Q86TM3 631 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CEP57Q86XR8 500 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms