RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
SMAD9-204ENST00000483941 CLCN1P35523 988 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 LHX1P48742 406 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 WDR5P61964 334 aaKnown RBP14.89□□□□□ -0.03
SMAD9-204ENST00000483941 CDR2Q01850 454 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 SOX4Q06945 474 aaPredicted RBP14.89□□□□□ -0.03
SMAD9-204ENST00000483941 CLLU1OSQ5K130 101 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 DSTYKQ6XUX3 929 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 LRRC43Q8N309 656 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 TOP1MTQ969P6 601 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 TNIP3Q96KP6 325 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 ZBED2Q9BTP6 218 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 TBC1D13Q9NVG8 400 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
SMAD9-204ENST00000483941 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CYB561D2O14569 222 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 FGFR1P11362 822 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ODC1P11926 461 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 GZMAP12544 262 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CD58P19256 250 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CLCNKBP51801 687 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF132P52740 706 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 DSC1Q08554 894 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ELAVL2Q12926 359 aaKnown RBP14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ASTE1Q2TB18 679 aaPredicted RBP14.88□□□□□ -0.03
SMAD9-204ENST00000483941 LEXMQ3ZCV2 418 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
SMAD9-204ENST00000483941 SCARA5Q6ZMJ2 495 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF662Q6ZS27 426 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF571Q7Z3V5 609 aaPredicted RBP14.88□□□□□ -0.03
SMAD9-204ENST00000483941 KIAA1328Q86T90 577 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CRIPAKQ8N1N5 446 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 UBR7Q8N806 425 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 EPS8L1Q8TE68 723 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 TMEM176AQ96HP8 235 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CASD1Q96PB1 797 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ARID3AQ99856 593 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 CXCL16Q9H2A7 254 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 INTUQ9ULD6 942 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 PYCARDQ9ULZ3 195 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 POLIQ9UNA4 740 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 PPP2R2CQ9Y2T4 447 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 ADGRG1Q9Y653 693 aa14.88□□□□□ -0.03
SMAD9-204ENST00000483941 TBKBP1A7MCY6 615 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 KIF2AO00139 706 aaPredicted RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 KRT86O43790 486 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 CILPO75339 1184 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 VDRP11473 427 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 ALADP13716 330 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 KCNA5P22460 613 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 WARSP23381 471 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 GNL1P36915 607 aaPredicted RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 MAGEA1P43355 309 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 AARSP49588 968 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 NHLH1Q02575 133 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 KIF5AQ12840 1032 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 ALKBH5Q6P6C2 394 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 TMCO2Q7Z6W1 182 aaPredicted RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 SLC47A2Q86VL8 602 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 COLGALT2Q8IYK4 626 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 CCAR2Q8N163 923 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 OR6B3Q8NGW1 331 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 CALR3Q96L12 384 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF518BQ9C0D4 1074 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 SMYD3Q9H7B4 428 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 GOLGA2P5Q9HBQ8 144 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 SEPT11Q9NVA2 429 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 STK39Q9UEW8 545 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 PUF60Q9UHX1 559 aaKnown RBP14.87□□□□□ -0.03
SMAD9-204ENST00000483941 ZNF318Q5VUA4 2279 aa14.87□□□□□ -0.03
SMAD9-204ENST00000483941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 THAP12O43422 761 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 TADA2AO75478 443 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 DGKIO75912 1065 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 LSM8O95777 96 aaKnown RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 PLEKP08567 350 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 IL9P15248 144 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 TYMPP19971 482 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 OR1G1P47890 313 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 SNX16P57768 344 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 DEFB103AP81534 67 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 SOWAHAQ2M3V2 549 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 ARHGAP29Q52LW3 1261 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 CCDC122Q5T0U0 273 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 TOGARAM2Q6ZUX3 1019 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 LIMS2Q7Z4I7 341 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 ADGRF2Q8IZF7 708 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 THEM5Q8N1Q8 247 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 MSANTD4Q8NCY6 345 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-204ENST00000483941 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
SMAD9-204ENST00000483941 HEXIM2Q96MH2 286 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms