RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 CDR2Q01850 454 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 ASTE1Q2TB18 679 aaPredicted RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 FAM171A1Q5VUB5 890 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 OVOS1Q6IE37 1185 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 ACOT1Q86TX2 421 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 GLYCTKQ8IVS8 523 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 DDX1Q92499 740 aaKnown RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 TNIP3Q96KP6 325 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 SYT11Q9BT88 431 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 UBE2OQ9C0C9 1292 aaKnown RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 DPEP3Q9H4B8 488 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 AAASQ9NRG9 546 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 SPTLC3Q9NUV7 552 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 ANXA13P27216 316 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 YWHAHQ04917 246 aaPredicted RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 GFPT1Q06210 699 aaPredicted RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 CEP57Q86XR8 500 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 TMEM169Q96HH4 297 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 H0YGN5 161 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 ACAT1P24752 427 aaKnown RBP20.21■□□□□ 0.83
PCCB-216ENST00000483687 FMO1Q01740 532 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 SLC18A3Q16572 532 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 SGO2Q562F6 1265 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 TOGARAM2Q6ZUX3 1019 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 SLC39A11Q8N1S5 342 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 C12orf29Q8N999 325 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 SP7Q8TDD2 431 aaPredicted RBP20.21■□□□□ 0.83
PCCB-216ENST00000483687 TFAP2BQ92481 460 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 GDF15Q99988 308 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 PYCARDQ9ULZ3 195 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 PCDHB12Q9Y5F1 795 aa20.21■□□□□ 0.83
PCCB-216ENST00000483687 A0A087X0T9 212 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 LCHNA4D1U4 455 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 IPO7O95373 1038 aaKnown RBP20.2■□□□□ 0.82
PCCB-216ENST00000483687 FAM228BP0C875 321 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 VDRP11473 427 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 CHRNB2P17787 502 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 PCSK1P29120 753 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 RABGGTBP53611 331 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 PSMC1P62191 440 aaKnown RBP20.2■□□□□ 0.82
PCCB-216ENST00000483687 CRYBG2Q8N1P7 616 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 THEM5Q8N1Q8 247 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
PCCB-216ENST00000483687 CLP1Q92989 425 aaKnown RBP20.2■□□□□ 0.82
PCCB-216ENST00000483687 DESI2Q9BSY9 194 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 SPG21Q9NZD8 308 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 KIAA1257Q9ULG3 409 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 GBF1Q92538 1859 aa20.2■□□□□ 0.82
PCCB-216ENST00000483687 NLRC5Q86WI3 1866 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 EIF3CLB5ME19 914 aaKnown RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 DDX3XO00571 662 aaKnown RBP eCLIP20.19■□□□□ 0.823e-13■■■■□ 24.8
PCCB-216ENST00000483687 MED7O43513 233 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 FGFR3P22607 806 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 SSTR3P32745 418 aaPredicted RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 PPM1AP35813 382 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 SPA17Q15506 151 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 OLIG1Q8TAK6 271 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 B3GALT6Q96L58 329 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 EIF3CQ99613 913 aaKnown RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 SYT15Q9BQS2 421 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 ZSWIM1Q9BR11 485 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 FAM49BQ9NUQ9 324 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 ZKSCAN5Q9Y2L8 839 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 LAMA3Q16787 3333 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 GRXCR1A8MXD5 290 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 FAM109BQ6ICB4 259 aaPredicted RBP20.19■□□□□ 0.82
PCCB-216ENST00000483687 ACRBPQ8NEB7 543 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 SLC30A5Q8TAD4 765 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 RTP3Q9BQQ7 232 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 ACBD6Q9BR61 282 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 CDH9Q9ULB4 789 aa20.19■□□□□ 0.82
PCCB-216ENST00000483687 TNRC18O15417 2968 aaPredicted RBP20.18■□□□□ 0.82
PCCB-216ENST00000483687 ATP2C2O75185 946 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 OAZ2O95190 189 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 LCA5LO95447 670 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 CFHP08603 1231 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 PTPN1P18031 435 aaKnown RBP20.18■□□□□ 0.82
PCCB-216ENST00000483687 KIAA0319Q5VV43 1072 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 PALB2Q86YC2 1186 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 PCDHB18PQ96TA0 734 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 TTPALQ9BTX7 342 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 PCDHGC3Q9UN70 934 aa20.18■□□□□ 0.82
PCCB-216ENST00000483687 PDE4DIPQ5VU43 2346 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 O00370 1275 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 ZNF263O14978 683 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 EFEMP2O95967 443 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 STILQ15468 1287 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 USP41Q3LFD5 358 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 RTP2Q5QGT7 225 aa20.17■□□□□ 0.82
PCCB-216ENST00000483687 CCDC122Q5T0U0 273 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms