RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 IER2Q9BTL4 223 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 FBXO4Q9UKT5 387 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 CFAP45Q9UL16 551 aa21.37■■□□□ 1.01
HPS4-213ENST00000483631 HEPACAM2A8MVW5 462 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 ZNF263O14978 683 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 HUS1O60921 280 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 TMEM191BP0C7N4 346 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 HAPLN1P10915 354 aaPredicted RBP21.36■■□□□ 1.01
HPS4-213ENST00000483631 CDC25CP30307 473 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 GDI1P31150 447 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 EHHADHQ08426 723 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 FCHO2Q0JRZ9 810 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 GRM2Q14416 872 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 MGAT5BQ3V5L5 792 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 FAM26FQ5R3K3 315 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 UNC13DQ70J99 1090 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 DPH6Q7L8W6 267 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 LRRTM3Q86VH5 581 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 CSGALNACT2Q8N6G5 542 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 TOP6BLQ8N6T0 577 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 ANKRD36BP1Q96IX9 119 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 PCIF1Q9H4Z3 704 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 PDE11AQ9HCR9 933 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 ABCB6Q9NP58 842 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 FAM13BQ9NYF5 915 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 PCDHB5Q9Y5E4 795 aa21.36■■□□□ 1.01
HPS4-213ENST00000483631 EP300Q09472 2414 aaPredicted RBP21.35■■□□□ 1.01
HPS4-213ENST00000483631 COL4A3Q01955 1670 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 GOLGA8IPA6NC78 632 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 SHISA7A6NL88 538 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 GOLGA8JA6NMD2 632 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 SOBPA7XYQ1 873 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 CHADO15335 359 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 LRRN2O75325 713 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 SP9P0CG40 484 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 ATF6P18850 670 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 TARSP26639 723 aaKnown RBP21.35■■□□□ 1.01
HPS4-213ENST00000483631 GABRR2P28476 465 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 VIPR2P41587 438 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 MYL7Q01449 175 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 MAMSTRQ6ZN01 415 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 PDCL2Q8N4E4 241 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 GCNAQ96QF7 691 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 MKNK1Q9BUB5 465 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 ATXN3LQ9H3M9 355 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 TASP1Q9H6P5 420 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 CGNQ9P2M7 1197 aaKnown RBP21.35■■□□□ 1.01
HPS4-213ENST00000483631 L1RE1Q9UN81 338 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 MTF2Q9Y483 593 aaPredicted RBP21.35■■□□□ 1.01
HPS4-213ENST00000483631 VPS13AQ96RL7 3174 aa21.35■■□□□ 1.01
HPS4-213ENST00000483631 DMDP11532 3685 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 PVALEFA0A1B0GWK0 134 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 ARNTLO00327 626 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 POLR2DO15514 142 aaKnown RBP21.34■■□□□ 1.01
HPS4-213ENST00000483631 LAMTOR5O43504 91 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 HOXD13P35453 343 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 LHX1P48742 406 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 MYO1EQ12965 1108 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 RESP18Q5W5W9 173 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 ARID3BQ8IVW6 561 aaPredicted RBP21.34■■□□□ 1.01
HPS4-213ENST00000483631 YAF2Q8IY57 180 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 MAML2Q8IZL2 1156 aaPredicted RBP21.34■■□□□ 1.01
HPS4-213ENST00000483631 ZNF687Q8N1G0 1237 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 GLIS3Q8NEA6 775 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 FAM200AQ8TCP9 573 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 MTMR12Q9C0I1 747 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 IL21Q9HBE4 155 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 SPATA6Q9NWH7 488 aaPredicted RBP21.34■■□□□ 1.01
HPS4-213ENST00000483631 HSPBP1Q9NZL4 362 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 SIX4Q9UIU6 781 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 PCDHA7Q9UN72 937 aa21.34■■□□□ 1.01
HPS4-213ENST00000483631 R3HCC1Q9Y3T6 440 aaKnown RBP21.34■■□□□ 1.01
HPS4-213ENST00000483631 GABRDO14764 452 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 SOAT2O75908 522 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 LMNAP02545 664 aaKnown RBP21.33■■□□□ 1.01
HPS4-213ENST00000483631 TNNC2P02585 160 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 CD72P21854 359 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 PCSK1P29120 753 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 ME1P48163 572 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 FZD5Q13467 585 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 TAF12Q16514 161 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 DUOXA2Q1HG44 320 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 BMT2Q1RMZ1 405 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 GPR158Q5T848 1215 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 LIMS2Q7Z4I7 341 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 WDR49Q8IV35 697 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 LPIN3Q9BQK8 851 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 DDX43Q9NXZ2 648 aaKnown RBP21.33■■□□□ 1.01
HPS4-213ENST00000483631 ABI2Q9NYB9 513 aaPredicted RBP21.33■■□□□ 1.01
HPS4-213ENST00000483631 RCOR1Q9UKL0 485 aa21.33■■□□□ 1.01
HPS4-213ENST00000483631 OTOGLQ3ZCN5 2332 aa21.33■■□□□ 1
HPS4-213ENST00000483631 OBSL1O75147 1896 aa21.32■■□□□ 1
HPS4-213ENST00000483631 NCANO14594 1321 aa21.32■■□□□ 1
HPS4-213ENST00000483631 ZNF638Q14966 1978 aaKnown RBP21.32■■□□□ 1
HPS4-213ENST00000483631 PRPF40AO75400 957 aaKnown RBP21.32■■□□□ 1
HPS4-213ENST00000483631 KRT19P08727 400 aa21.32■■□□□ 1
HPS4-213ENST00000483631 CSH1P0DML2 217 aa21.32■■□□□ 1
HPS4-213ENST00000483631 CSH2P0DML3 217 aa21.32■■□□□ 1
HPS4-213ENST00000483631 DDX6P26196 483 aaKnown RBP eCLIP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms