RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 ECI2O75521 394 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 CLSTN1O94985 981 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 GJA1P17302 382 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 CLCN5P51795 746 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 GPC5P78333 572 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 TAF12Q16514 161 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 SCARA3Q6AZY7 606 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 KRBA2Q6ZNG9 492 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 PCDHB5Q9Y5E4 795 aa25.27■■□□□ 1.64
RHBDF1-208ENST00000482904 A0A1W2PRU2 124 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 KRBA1A5PL33 1030 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 ACAT1P24752 427 aaKnown RBP25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 TEAD2Q15562 447 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 NFE2Q16621 373 aaPredicted RBP25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 FAM78AQ5JUQ0 283 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 TRAPPC11Q7Z392 1133 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 LRRTM3Q86VH5 581 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 TMC8Q8IU68 726 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 PSMG2Q969U7 264 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 LPIN3Q9BQK8 851 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 TBC1D17Q9HA65 648 aa25.26■■□□□ 1.63
RHBDF1-208ENST00000482904 KIF20AO95235 890 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 NPR3P17342 541 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 AOC1P19801 751 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 PCSK1P29120 753 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 NUBP1P53384 320 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 PFKPQ01813 784 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 NHLH1Q02575 133 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 SHKBP1Q8TBC3 707 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 SPATA18Q8TC71 538 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 ELSPBP1Q96BH3 223 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 GCNAQ96QF7 691 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 ACBD6Q9BR61 282 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 ZFP14Q9HCL3 533 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 NOTCH4Q99466 2003 aa25.25■■□□□ 1.63
RHBDF1-208ENST00000482904 ZNF202O95125 648 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 FGF19O95750 216 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 ATF6P18850 670 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 LHX1P48742 406 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 TRPC3Q13507 836 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 INTS6LQ5JSJ4 861 aaKnown RBP25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 TANGO2Q6ICL3 276 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 DNAJB7Q7Z6W7 309 aaPredicted RBP25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 ZSCAN18Q8TBC5 510 aaPredicted RBP25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 SMARCD2Q92925 531 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 ASB16Q96NS5 453 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 MMS19Q96T76 1030 aa25.24■■□□□ 1.63
RHBDF1-208ENST00000482904 NRG2O14511 850 aaPredicted RBP25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 PHACTR2O75167 634 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 MOSPD3O75425 235 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 HAPLN1P10915 354 aaPredicted RBP25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 FCARP24071 287 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 DPYDQ12882 1025 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 SOWAHAQ2M3V2 549 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 ARHGAP15Q53QZ3 475 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 OSTM1Q86WC4 334 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 GIPC2Q8TF65 315 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 PI4K2AQ9BTU6 479 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 GPR88Q9GZN0 384 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 ATXN3LQ9H3M9 355 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 ZNF334Q9HCZ1 680 aaPredicted RBP25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 TMLHEQ9NVH6 421 aa25.23■■□□□ 1.63
RHBDF1-208ENST00000482904 PDXKO00764 312 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 GALR2O43603 387 aaPredicted RBP25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 RHOBTB3O94955 611 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 NR3C1P04150 777 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 GABRR2P28476 465 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 TNNC1P63316 161 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 BIRC3Q13489 604 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 GRM2Q14416 872 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 POTEHQ6S545 545 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 DPH6Q7L8W6 267 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 SHDQ96IW2 340 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 ZSWIM3Q96MP5 696 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 LRRC3Q9BY71 257 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 PLA2G2FQ9BZM2 168 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 KCTD10Q9H3F6 313 aa25.22■■□□□ 1.63
RHBDF1-208ENST00000482904 HCRTO43612 131 aa25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 CALUO43852 315 aaPredicted RBP25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 CASP4P49662 377 aa25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 TCF15Q12870 199 aa25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 SNW1Q13573 536 aaKnown RBP25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 MLF2Q15773 248 aaPredicted RBP25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 CEP135Q66GS9 1140 aa25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 SPATA2LQ8IUW3 424 aaPredicted RBP25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 SYT15Q9BQS2 421 aa25.21■■□□□ 1.63
RHBDF1-208ENST00000482904 GABRDO14764 452 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 PI15O43692 258 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 CDC25CP30307 473 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 SLC9A9Q8IVB4 645 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 IRF2BPLQ9H1B7 796 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 BRD9Q9H8M2 597 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 ABCB6Q9NP58 842 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 GTF3C4Q9UKN8 822 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 MAPK8IP1Q9UQF2 711 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 FRMD4BQ9Y2L6 1034 aa25.2■■□□□ 1.62
RHBDF1-208ENST00000482904 VIPR2P41587 438 aa25.19■■□□□ 1.62
RHBDF1-208ENST00000482904 AP3M2P53677 418 aa25.19■■□□□ 1.62
RHBDF1-208ENST00000482904 PSMC1P62191 440 aaKnown RBP25.19■■□□□ 1.62
RHBDF1-208ENST00000482904 CCDC142Q17RM4 750 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms