RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GJA10Q969M2 543 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 ERP27Q96DN0 273 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 IWS1Q96ST2 819 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 CHP1Q99653 195 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 EIF2AK1Q9BQI3 630 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 TEKT3Q9BXF9 490 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 IFIH1Q9BYX4 1025 aaKnown RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 KIAA1683Q9H0B3 1180 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 EPN3Q9H201 632 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 VEZTQ9HBM0 779 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 FAM53CQ9NYF3 392 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 ARMCX3Q9UH62 379 aaPredicted RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 IP6K2Q9UHH9 426 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 KCNG1Q9UIX4 513 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 GUCA1BQ9UMX6 200 aa8.34□□□□□ -1.07
SNX13-208ENST00000482558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
SNX13-208ENST00000482558 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 LTBP3Q9NS15 1303 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TARSL2A2RTX5 802 aaKnown RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 GABRDO14764 452 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 DKC1O60832 514 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNX13-208ENST00000482558 RAD17O75943 681 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 NPTXRO95502 500 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 CFBP00751 764 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 AFPP02771 609 aaKnown RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 ADH5P11766 374 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 DPEP1P16444 411 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TYRP1P17643 537 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TCP1P17987 556 aaKnown RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 SCP2P22307 547 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 NR2F2P24468 414 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 GUCY2CP25092 1073 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 POLD1P28340 1107 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 KIF11P52732 1056 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 AMPD2Q01433 879 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 CC2D1AQ6P1N0 951 aaPredicted RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 SPOCD1Q6ZMY3 1216 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 RRAGAQ7L523 313 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 LDHDQ86WU2 507 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 RDM1Q8NG50 284 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 BCL7CQ8WUZ0 217 aaPredicted RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 ATXN2LQ8WWM7 1075 aaKnown RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 MXRA8Q9BRK3 442 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 ZNF577Q9BSK1 485 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TAOK3Q9H2K8 898 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 TBC1D22BQ9NU19 505 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 AGPAT5Q9NUQ2 364 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 AIPL1Q9NZN9 384 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 FRMD4BQ9Y2L6 1034 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 IPPQ9Y573 584 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 CTDP1Q9Y5B0 961 aaPredicted RBP8.33□□□□□ -1.08
SNX13-208ENST00000482558 PCDHA13Q9Y5I0 950 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 PCDHAC2Q9Y5I4 1007 aa8.33□□□□□ -1.08
SNX13-208ENST00000482558 FRMPD4Q14CM0 1322 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 A0A1W2PQH9 124 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 CLRN2A0PK11 232 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 FAM221AA4D161 298 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 FANCGO15287 622 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 NBNO60934 754 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ZBED4O75132 1171 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 CILPO75339 1184 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 SLITRK3O94933 977 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 FBXO21O94952 628 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 LYPLA2O95372 231 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 KCNA3P22001 575 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 PSMC2P35998 433 aaKnown RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 MAGEA1P43355 309 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ZNF131P52739 623 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 OAZ1P54368 228 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 HERVK_113P62684 666 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 RPL6Q02878 288 aaKnown RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 PTPN11Q06124 597 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 GBX1Q14549 363 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 UTP14CQ5TAP6 766 aaKnown RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 RINT1Q6NUQ1 792 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 WDR93Q6P2C0 686 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 C1orf228Q6PIY5 440 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 GBP6Q6ZN66 633 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ZNF765Q7L2R6 523 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ATG4DQ86TL0 474 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 CNTD1Q8N815 330 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ACER1Q8TDN7 264 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 TTC17Q96AE7 1141 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 NOX5Q96PH1 765 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 REEP2Q9BRK0 252 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 BHMT2Q9H2M3 363 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 LRRC4CQ9HCJ2 640 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 ZNF277Q9NRM2 450 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms