RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 LPIN3Q9BQK8 851 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 ACBD6Q9BR61 282 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 GZF1Q9H116 711 aaPredicted RBP17.77■□□□□ 0.44
VAMP4-204ENST00000482519 DNAJC25Q9H1X3 360 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 TMLHEQ9NVH6 421 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 DMAC2Q9NW81 257 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 GDE1Q9NZC3 331 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 PCDHB5Q9Y5E4 795 aa17.77■□□□□ 0.44
VAMP4-204ENST00000482519 LRRIQ3A6PVS8 624 aaPredicted RBP17.76■□□□□ 0.43
VAMP4-204ENST00000482519 STK25O00506 426 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 NRG2O14511 850 aaPredicted RBP17.76■□□□□ 0.43
VAMP4-204ENST00000482519 SRFP11831 508 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 NR2F2P24468 414 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 LHX1P48742 406 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 MYL6P60660 151 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 SMARCB1Q12824 385 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 VEPH1Q14D04 833 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 TEAD2Q15562 447 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 WDR72Q3MJ13 1102 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 DNAJB7Q7Z6W7 309 aaPredicted RBP17.76■□□□□ 0.43
VAMP4-204ENST00000482519 ITIH5Q86UX2 942 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 SLC9A9Q8IVB4 645 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 LEMD2Q8NC56 503 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 FLCNQ8NFG4 579 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 ENGASEQ8NFI3 743 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 SPPL2BQ8TCT7 592 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 PLEKHO2Q8TD55 490 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 C2orf15Q8WU43 125 aaKnown RBP17.76■□□□□ 0.43
VAMP4-204ENST00000482519 PI4K2AQ9BTU6 479 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 SLITRK6Q9H5Y7 841 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 RMND1Q9NWS8 449 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 NXF1Q9UBU9 619 aaKnown RBP17.76■□□□□ 0.43
VAMP4-204ENST00000482519 GTF3C4Q9UKN8 822 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 CA14Q9ULX7 337 aa17.76■□□□□ 0.43
VAMP4-204ENST00000482519 ZDBF2Q9HCK1 2354 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 A0A1W2PRU2 124 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 SMC2O95347 1197 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 PDGFRBP09619 1106 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 RFX1P22670 979 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 PCSK1P29120 753 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 TNNC1P63316 161 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 GPC5P78333 572 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 DLG4P78352 724 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 NFE2Q16621 373 aaPredicted RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 INTS6LQ5JSJ4 861 aaKnown RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 FAM78AQ5JUQ0 283 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 POTEHQ6S545 545 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 GUF1Q8N442 669 aaKnown RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 PSMG2Q969U7 264 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 ZSWIM3Q96MP5 696 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 SNX25Q9H3E2 840 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 HSFX1Q9UBD0 423 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 HOOK1Q9UJC3 728 aaKnown RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
VAMP4-204ENST00000482519 TRAF3IP3Q9Y228 551 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 ASB3Q9Y575 518 aa17.75■□□□□ 0.43
VAMP4-204ENST00000482519 ATP2C2O75185 946 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 MICAL2O94851 1124 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 HAPLN1P10915 354 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 ATF6P18850 670 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 LMO2P25791 158 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 RPL13P26373 211 aaKnown RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 EPHA5P54756 1037 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 PSMC1P62191 440 aaKnown RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 CCDC142Q17RM4 750 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 TDRD10Q5VZ19 366 aaKnown RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 TANGO2Q6ICL3 276 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 DPH6Q7L8W6 267 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 SPATA2LQ8IUW3 424 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 SHKBP1Q8TBC3 707 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 KBTBD7Q8WVZ9 684 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 SMARCE1Q969G3 411 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 ELMO3Q96BJ8 720 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 ZNF334Q9HCZ1 680 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-204ENST00000482519 WNT16Q9UBV4 365 aa17.74■□□□□ 0.43
VAMP4-204ENST00000482519 MYBPHLA2RUH7 354 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GABRDO14764 452 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
VAMP4-204ENST00000482519 MOSPD3O75425 235 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 CYP2F1P24903 491 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GABRR2P28476 465 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 AVPR2P30518 371 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GNL1P36915 607 aaPredicted RBP17.73■□□□□ 0.43
VAMP4-204ENST00000482519 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GPR15P49685 360 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 AP3M2P53677 418 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 ADAM9Q13443 819 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 NCOA4Q13772 614 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 ZNF699Q32M78 642 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 IER5LQ5T953 404 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 TMC8Q8IU68 726 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 GPIHBP1Q8IV16 184 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 OR6B3Q8NGW1 331 aa17.73■□□□□ 0.43
VAMP4-204ENST00000482519 SPATA18Q8TC71 538 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms