RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SPATA31D3P0C874 917 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 WARSP23381 471 aaKnown RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 PAX3P23760 479 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 TBXAS1P24557 533 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 OR1D2P34982 312 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 NDST1P52848 882 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 POLR2FP61218 127 aaKnown RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 ADGRE1Q14246 886 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 LLGL2Q6P1M3 1020 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 SPATA31D4Q6ZUB0 917 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 TMEM86AQ8N2M4 240 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 MAFAQ8NHW3 353 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 PIK3R5Q8WYR1 880 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 MRPL38Q96DV4 380 aaKnown RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 PGLYRP2Q96PD5 576 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 ERGIC2Q96RQ1 377 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 TWNKQ96RR1 684 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 RTP3Q9BQQ7 232 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 LMAN2LQ9H0V9 348 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 GANQ9H2C0 597 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 CISHQ9NSE2 258 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 MTRRQ9UBK8 725 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 DOCK6Q96HP0 2047 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
HDAC1-208ENST00000482310 GREB1Q4ZG55 1949 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 TACC1O75410 805 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 TRIM21P19474 475 aaKnown RBP14.12□□□□□ -0.15
HDAC1-208ENST00000482310 KLRC2P26717 231 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 NRIP1P48552 1158 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 LHX1P48742 406 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 MFAP3P55082 362 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 TSPY1Q01534 308 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 SLC39A12Q504Y0 691 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 MDH1BQ5I0G3 518 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 TMEM270Q6UE05 265 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 ACOT1Q86TX2 421 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 MRPL43Q8N983 215 aaKnown RBP14.12□□□□□ -0.15
HDAC1-208ENST00000482310 PPM1EQ8WY54 764 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 SYT15Q9BQS2 421 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 CLSTN3Q9BQT9 956 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 EMILIN2Q9BXX0 1053 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 TLE6Q9H808 572 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 NGRNQ9NPE2 291 aaKnown RBP14.12□□□□□ -0.15
HDAC1-208ENST00000482310 STK39Q9UEW8 545 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 PATJQ8NI35 1801 aa14.12□□□□□ -0.15
HDAC1-208ENST00000482310 NOL4O94818 638 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 OAZ2O95190 189 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 UCHL3P15374 230 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 SSTR3P32745 418 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 YWHAEP62258 255 aaKnown RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 ROR1Q01973 937 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 MRPL58Q14197 206 aaKnown RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 DRAP1Q14919 205 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 CCDC85BQ15834 202 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 TCEAL5Q5H9L2 206 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 INTS6LQ5JSJ4 861 aaKnown RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 DPY19L2P1Q6NXN4 242 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 PDXDC1Q6P996 788 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 EP400NLQ6ZTU2 488 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 CPLX3Q8WVH0 158 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 RHOBTB2Q9BYZ6 727 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 ELOVL4Q9GZR5 314 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 FAM49BQ9NUQ9 324 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 TMLHEQ9NVH6 421 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 ABI2Q9NYB9 513 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 GTF3C4Q9UKN8 822 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 BARX2Q9UMQ3 279 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-208ENST00000482310 SSX2IPQ9Y2D8 614 aa14.11□□□□□ -0.15
HDAC1-208ENST00000482310 FAM170AA1A519 330 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 MYBPHLA2RUH7 354 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 OR6C75A6NL08 312 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 GABRDO14764 452 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 LILRB3O75022 631 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CLASP2O75122 1294 aaKnown RBP14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CILPO75339 1184 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 ADH1AP07327 375 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CCDC130P13994 396 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CD19P15391 556 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 FOSL2P15408 326 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 PCSK1P29120 753 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 NDUFV1P49821 464 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 ZNF75DP51815 510 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CYP27A1Q02318 531 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 GCNT1Q02742 428 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 CREMQ03060 361 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
HDAC1-208ENST00000482310 SARM1Q6SZW1 724 aa14.1□□□□□ -0.15
HDAC1-208ENST00000482310 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms