RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 DDX43Q9NXZ2 648 aaKnown RBP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 CFAP45Q9UL16 551 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 A0A1B0GVL5 298 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 KANSL1LA0AUZ9 987 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 HEPACAM2A8MVW5 462 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TGFB1I1O43294 461 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 HUS1O60921 280 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 CLSTN1O94985 981 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TNNC2P02585 160 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 PFKFB1P16118 471 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 PAX3P23760 479 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 GDI1P31150 447 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 STARD6P59095 220 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 PSMC1P62191 440 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 RBP5P82980 135 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TSPY1Q01534 308 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 EHHADHQ08426 723 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TAF12Q16514 161 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 SNRNP35Q16560 246 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 GPR158Q5T848 1215 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 CNNM4Q6P4Q7 775 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 GAREM2Q75VX8 874 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 LRRC52Q8N7C0 313 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 CCDC127Q96BQ5 260 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 SHDQ96IW2 340 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 SPATA32Q96LK8 384 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 SMG9Q9H0W8 520 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 IRF2BPLQ9H1B7 796 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 DLGAP2Q9P1A6 1054 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
CPSF4-212ENST00000482251 UBE4BO95155 1302 aa11.26□□□□□ -0.61
CPSF4-212ENST00000482251 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 MICAL2O94851 1124 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PRAMEF12O95522 483 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 HAPLN1P10915 354 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PSMC3P17980 439 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 TNNI1P19237 187 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PRKCQQ04759 706 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 HS2ST1Q7LGA3 356 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 ZNF507Q8TCN5 953 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 SPPL2BQ8TCT7 592 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 HPDLQ96IR7 371 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 ZFYVE19Q96K21 471 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 GCNAQ96QF7 691 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 MKNK1Q9BUB5 465 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 MAGED2Q9UNF1 606 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 R3HCC1Q9Y3T6 440 aaKnown RBP11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 R4GN57 208 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
CPSF4-212ENST00000482251 OBSL1O75147 1896 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 PRR23AA6NEV1 266 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 ZNF263O14978 683 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 KLRC4O43908 158 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 SLFN14P0C7P3 912 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 CYP2F1P24903 491 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 NBL1P41271 181 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 SOX9P48436 509 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 CASP4P49662 377 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 KRT85P78386 507 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 MYL7Q01449 175 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 CYP24A1Q07973 514 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 MYO1EQ12965 1108 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 DDR2Q16832 855 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 SOWAHAQ2M3V2 549 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 KMT5BQ4FZB7 885 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 ARHGAP15Q53QZ3 475 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-212ENST00000482251 YAF2Q8IY57 180 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 XXYLT1Q8NBI6 393 aa11.24□□□□□ -0.61
CPSF4-212ENST00000482251 KIAA0895Q8NCT3 520 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms