RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 DNAJC25Q9H1X3 360 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 SLC2A4RGQ9NR83 387 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-213ENST00000482192 TRAF3IP3Q9Y228 551 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 GABRDO14764 452 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 SOAT2O75908 522 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 ATF6P18850 670 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 ACAT1P24752 427 aaKnown RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 PCSK1P29120 753 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 AVPR2P30518 371 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 SCN1AP35498 2009 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 CLDN10P78369 228 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 TRPC3Q13507 836 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 INTS6LQ5JSJ4 861 aaKnown RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 DNAJB7Q7Z6W7 309 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 GPR88Q9GZN0 384 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 ABCB6Q9NP58 842 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-213ENST00000482192 MAPK8IP1Q9UQF2 711 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 FRMD4BQ9Y2L6 1034 aa12.75□□□□□ -0.37
HMGN1-213ENST00000482192 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 PHACTR2O75167 634 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 MOSPD3O75425 235 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 STAU1O95793 577 aaKnown RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 CST3P01034 146 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 HAPLN1P10915 354 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ATICP31939 592 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 PLA2G5P39877 138 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 CASP4P49662 377 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 CLCN5P51795 746 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 CDR1P51861 262 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 NUBP1P53384 320 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 TNNC1P63316 161 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 BIRC3Q13489 604 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 PNOCQ13519 176 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 TEAD2Q15562 447 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 NFIL3Q16649 462 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 FAM78AQ5JUQ0 283 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 PARD3BQ8TEW8 1205 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 KBTBD7Q8WVZ9 684 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 SMARCD2Q92925 531 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ELSPBP1Q96BH3 223 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 FAM122AQ96E09 287 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 TIGD1Q96MW7 591 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 PKMYT1Q99640 499 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ZFP14Q9HCL3 533 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 ARHGEF3Q9NR81 526 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
HMGN1-213ENST00000482192 HOOK1Q9UJC3 728 aaKnown RBP12.74□□□□□ -0.37
HMGN1-213ENST00000482192 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 MAPK13O15264 365 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 SMC2O95347 1197 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 GJA1P17302 382 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 FCARP24071 287 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 NR2F2P24468 414 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 RPL13P26373 211 aaKnown RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 MYL6P60660 151 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 GPC5P78333 572 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 PFKPQ01813 784 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 TAF12Q16514 161 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 WDR72Q3MJ13 1102 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 CWF19L1Q69YN2 538 aaKnown RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 POTEHQ6S545 545 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 OSTM1Q86WC4 334 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 TMEM105Q8N8V8 129 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 ZSCAN18Q8TBC5 510 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 FUBP3Q96I24 572 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGN1-213ENST00000482192 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 GCNAQ96QF7 691 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 LPIN3Q9BQK8 851 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
HMGN1-213ENST00000482192 SLITRK6Q9H5Y7 841 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms