RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 ALDH7A1P49419 539 aaKnown RBP12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 GFPT1Q06210 699 aaPredicted RBP12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 ACOT1Q86TX2 421 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 GLYCTKQ8IVS8 523 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 ACRBPQ8NEB7 543 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 KIAA1524Q8TCG1 905 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 ZNF558Q96NG5 402 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 RAD9AQ99638 391 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 RTP3Q9BQQ7 232 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 DESI2Q9BSY9 194 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 GPR62Q9BZJ7 368 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 NAGPAQ9UK23 515 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 KIAA1257Q9ULG3 409 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 REXO2Q9Y3B8 237 aaKnown RBP12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 INSL6Q9Y581 213 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 ADGRG1Q9Y653 693 aa12.68□□□□□ -0.38
SNRNP25-206ENST00000481947 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 CARNS1A5YM72 827 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 SYN3O14994 580 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 CFHP08603 1231 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 CD19P15391 556 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 FGFR3P22607 806 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 TKTP29401 623 aaKnown RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 METTL23Q86XA0 190 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 PALB2Q86YC2 1186 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 SLC39A11Q8N1S5 342 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 HEXIM2Q96MH2 286 aaKnown RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 LPIN3Q9BQK8 851 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
SNRNP25-206ENST00000481947 O00370 1275 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 MED7O43513 233 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 ATP2C2O75185 946 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CYP1A1P04798 512 aaPredicted RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CYP27A1Q02318 531 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 SHHQ15465 462 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CNGA2Q16280 664 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CLEC16AQ2KHT3 1053 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 SPOUT1Q5T280 376 aaKnown RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 FIBCD1Q8N539 461 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 C12orf29Q8N999 325 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 GDF15Q99988 308 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 ACBD6Q9BR61 282 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
SNRNP25-206ENST00000481947 PLXNA4Q9HCM2 1894 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 PTPRDP23468 1912 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 LCHNA4D1U4 455 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 TLL1O43897 1013 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 OAZ2O95190 189 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 CCDC175P0C221 793 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 GZMAP12544 262 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 UNGP13051 313 aaPredicted RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 PCSK1P29120 753 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 CDH5P33151 784 aaPredicted RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 PSMC1P62191 440 aaKnown RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 NOMO3P69849 1222 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 KRT83P78385 493 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 STILQ15468 1287 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 SPA17Q15506 151 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 CCDC122Q5T0U0 273 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 DENND1BQ6P3S1 775 aa12.65□□□□□ -0.38
SNRNP25-206ENST00000481947 ALKBH5Q6P6C2 394 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms